Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC9.17□□□□□ -0.94
Cdx1P18111 Gm13326-201ENSMUST00000118730 1011 ntBASIC9.17□□□□□ -0.94
Cdx1P18111 Gm14109-201ENSMUST00000118814 309 ntBASIC9.17□□□□□ -0.94
Cdx1P18111 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cdx1P18111 Gm14277-201ENSMUST00000121195 360 ntBASIC9.17□□□□□ -0.94
Cdx1P18111 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC9.17□□□□□ -0.94
Cdx1P18111 Gm26361-201ENSMUST00000158868 186 ntBASIC9.17□□□□□ -0.94
Cdx1P18111 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC9.17□□□□□ -0.94
Cdx1P18111 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cdx1P18111 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC9.17□□□□□ -0.94
Cdx1P18111 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Cdx1P18111 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Cdx1P18111 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC9.17□□□□□ -0.94
Cdx1P18111 Gm38092-201ENSMUST00000195600 653 ntBASIC9.17□□□□□ -0.94
Cdx1P18111 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC9.17□□□□□ -0.94
Cdx1P18111 Gm9445-201ENSMUST00000207454 1285 ntBASIC9.17□□□□□ -0.94
Cdx1P18111 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC9.17□□□□□ -0.94
Cdx1P18111 AC166051.1-201ENSMUST00000214313 210 ntBASIC9.17□□□□□ -0.94
Cdx1P18111 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC9.17□□□□□ -0.94
Cdx1P18111 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cdx1P18111 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cdx1P18111 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cdx1P18111 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cdx1P18111 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cdx1P18111 Gm22058-201ENSMUST00000083393 310 ntBASIC9.17□□□□□ -0.94
Cdx1P18111 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cdx1P18111 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC9.17□□□□□ -0.94
Cdx1P18111 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Cdx1P18111 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cdx1P18111 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Cdx1P18111 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Cdx1P18111 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Cdx1P18111 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cdx1P18111 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cdx1P18111 Gm26574-201ENSMUST00000181876 2141 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cdx1P18111 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cdx1P18111 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cdx1P18111 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC9.17□□□□□ -0.94
Cdx1P18111 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cdx1P18111 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cdx1P18111 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cdx1P18111 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC9.17□□□□□ -0.94
Cdx1P18111 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Cdx1P18111 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Cdx1P18111 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC9.16□□□□□ -0.94
Cdx1P18111 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Cdx1P18111 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Cdx1P18111 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Cdx1P18111 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Retreg1-206ENSMUST00000228306 1430 ntBASIC9.16□□□□□ -0.94
Cdx1P18111 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Ilf3-201ENSMUST00000067646 3549 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Gm42608-201ENSMUST00000197563 2018 ntBASIC9.16□□□□□ -0.94
Cdx1P18111 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC9.16□□□□□ -0.94
Cdx1P18111 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC9.16□□□□□ -0.94
Cdx1P18111 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC9.16□□□□□ -0.94
Cdx1P18111 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
Cdx1P18111 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Gm14028-201ENSMUST00000117434 479 ntBASIC9.16□□□□□ -0.94
Cdx1P18111 Gm12291-201ENSMUST00000121627 311 ntBASIC9.16□□□□□ -0.94
Cdx1P18111 Gm8908-201ENSMUST00000121633 1024 ntBASIC9.16□□□□□ -0.94
Cdx1P18111 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC9.16□□□□□ -0.94
Cdx1P18111 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC9.16□□□□□ -0.94
Cdx1P18111 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC9.16□□□□□ -0.94
Cdx1P18111 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC9.16□□□□□ -0.94
Cdx1P18111 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Gstp-ps-201ENSMUST00000195526 631 ntBASIC9.16□□□□□ -0.94
Cdx1P18111 Gm3786-201ENSMUST00000202659 378 ntBASIC9.16□□□□□ -0.94
Cdx1P18111 Gm44882-201ENSMUST00000205702 802 ntBASIC9.16□□□□□ -0.94
Cdx1P18111 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC9.16□□□□□ -0.94
Cdx1P18111 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC9.16□□□□□ -0.94
Cdx1P18111 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC9.16□□□□□ -0.94
Cdx1P18111 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Cdx1P18111 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC9.16□□□□□ -0.94
Cdx1P18111 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms