Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Fv4P11370 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Fv4P11370 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Fv4P11370 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.91□□□□□ -0.66
Fv4P11370 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fv4P11370 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Fv4P11370 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Fv4P11370 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.9□□□□□ -0.66
Fv4P11370 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Fv4P11370 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Fv4P11370 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Fv4P11370 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fv4P11370 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fv4P11370 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fv4P11370 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.9□□□□□ -0.66
Fv4P11370 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fv4P11370 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fv4P11370 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fv4P11370 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fv4P11370 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Fv4P11370 Gm4294-201ENSMUST00000105169 614 ntBASIC10.9□□□□□ -0.66
Fv4P11370 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Fv4P11370 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fv4P11370 Gm14058-201ENSMUST00000116082 735 ntBASIC10.9□□□□□ -0.66
Fv4P11370 Gm13809-201ENSMUST00000117921 597 ntBASIC10.9□□□□□ -0.66
Fv4P11370 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.9□□□□□ -0.66
Fv4P11370 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.9□□□□□ -0.66
Fv4P11370 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fv4P11370 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Fv4P11370 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Fv4P11370 Gm7741-201ENSMUST00000181445 989 ntBASIC10.9□□□□□ -0.66
Fv4P11370 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.9□□□□□ -0.66
Fv4P11370 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC10.9□□□□□ -0.66
Fv4P11370 Gm44506-201ENSMUST00000206278 965 ntBASIC10.9□□□□□ -0.66
Fv4P11370 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.9□□□□□ -0.66
Fv4P11370 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.9□□□□□ -0.66
Fv4P11370 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fv4P11370 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Fv4P11370 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fv4P11370 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Fv4P11370 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fv4P11370 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.9□□□□□ -0.66
Fv4P11370 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fv4P11370 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fv4P11370 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC10.9□□□□□ -0.66
Fv4P11370 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Fv4P11370 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Fv4P11370 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fv4P11370 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Fv4P11370 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Fv4P11370 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Fv4P11370 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Fv4P11370 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Fv4P11370 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.9□□□□□ -0.67
Fv4P11370 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Fv4P11370 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Fv4P11370 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Fv4P11370 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.89□□□□□ -0.67
Fv4P11370 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.89□□□□□ -0.67
Fv4P11370 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.89□□□□□ -0.67
Fv4P11370 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 Gm11450-201ENSMUST00000121144 333 ntBASIC10.89□□□□□ -0.67
Fv4P11370 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.89□□□□□ -0.67
Fv4P11370 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.89□□□□□ -0.67
Fv4P11370 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC10.89□□□□□ -0.67
Fv4P11370 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC10.89□□□□□ -0.67
Fv4P11370 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.89□□□□□ -0.67
Fv4P11370 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.89□□□□□ -0.67
Fv4P11370 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.89□□□□□ -0.67
Fv4P11370 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.89□□□□□ -0.67
Fv4P11370 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.89□□□□□ -0.67
Fv4P11370 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.89□□□□□ -0.67
Fv4P11370 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.89□□□□□ -0.67
Fv4P11370 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Fv4P11370 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms