Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.14□□□□□ -0.63
Hoxa4P06798 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.14□□□□□ -0.63
Hoxa4P06798 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
Hoxa4P06798 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.14□□□□□ -0.63
Hoxa4P06798 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.14□□□□□ -0.63
Hoxa4P06798 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Hoxa4P06798 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa4P06798 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.14□□□□□ -0.63
Hoxa4P06798 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa4P06798 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa4P06798 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa4P06798 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa4P06798 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.14□□□□□ -0.63
Hoxa4P06798 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa4P06798 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa4P06798 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Hoxa4P06798 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa4P06798 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.13□□□□□ -0.63
Hoxa4P06798 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.13□□□□□ -0.63
Hoxa4P06798 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.13□□□□□ -0.63
Hoxa4P06798 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Hoxa4P06798 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Hoxa4P06798 Gm12899-201ENSMUST00000120565 551 ntBASIC11.13□□□□□ -0.63
Hoxa4P06798 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.13□□□□□ -0.63
Hoxa4P06798 Gm13284-201ENSMUST00000121020 547 ntBASIC11.13□□□□□ -0.63
Hoxa4P06798 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.13□□□□□ -0.63
Hoxa4P06798 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 Gm22442-201ENSMUST00000157256 144 ntBASIC11.13□□□□□ -0.63
Hoxa4P06798 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.13□□□□□ -0.63
Hoxa4P06798 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.13□□□□□ -0.63
Hoxa4P06798 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.13□□□□□ -0.63
Hoxa4P06798 Gm42518-201ENSMUST00000196277 938 ntBASIC11.13□□□□□ -0.63
Hoxa4P06798 Gm8365-201ENSMUST00000197334 648 ntBASIC11.13□□□□□ -0.63
Hoxa4P06798 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 Gm42657-201ENSMUST00000201746 211 ntBASIC11.13□□□□□ -0.63
Hoxa4P06798 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.13□□□□□ -0.63
Hoxa4P06798 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.13□□□□□ -0.63
Hoxa4P06798 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.13□□□□□ -0.63
Hoxa4P06798 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Hoxa4P06798 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Hoxa4P06798 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.13□□□□□ -0.63
Hoxa4P06798 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.13□□□□□ -0.63
Hoxa4P06798 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.13□□□□□ -0.63
Hoxa4P06798 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Hoxa4P06798 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa4P06798 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.12□□□□□ -0.63
Hoxa4P06798 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Hoxa4P06798 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Hoxa4P06798 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Hoxa4P06798 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Hoxa4P06798 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.12□□□□□ -0.63
Hoxa4P06798 Gm9133-201ENSMUST00000118289 540 ntBASIC11.12□□□□□ -0.63
Hoxa4P06798 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.12□□□□□ -0.63
Hoxa4P06798 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Hoxa4P06798 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.12□□□□□ -0.63
Hoxa4P06798 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.12□□□□□ -0.63
Hoxa4P06798 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxa4P06798 Gm9358-201ENSMUST00000183067 927 ntBASIC11.12□□□□□ -0.63
Hoxa4P06798 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.12□□□□□ -0.63
Hoxa4P06798 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.12□□□□□ -0.63
Hoxa4P06798 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.12□□□□□ -0.63
Hoxa4P06798 Gm18561-201ENSMUST00000206027 804 ntBASIC11.12□□□□□ -0.63
Hoxa4P06798 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms