Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Gm9062-201ENSMUST00000117712 727 ntBASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Gm16166-201ENSMUST00000118291 787 ntBASIC9.75□□□□□ -0.85
Igh-VJ558P01758 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Mup-ps26-201ENSMUST00000121751 202 ntBASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Mir5120-201ENSMUST00000175020 78 ntBASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Gm21092-201ENSMUST00000178995 955 ntBASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Spcs1-203ENSMUST00000226374 592 ntBASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Gm23105-201ENSMUST00000083719 134 ntBASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 AC124732.3-201ENSMUST00000221835 1765 ntBASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Igh-VJ558P01758 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Gm8752-201ENSMUST00000173427 1694 ntBASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Gm9466-201ENSMUST00000218144 2246 ntBASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Gm8737-201ENSMUST00000122208 642 ntBASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Gm4726-201ENSMUST00000135604 736 ntBASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Gm6019-201ENSMUST00000148369 736 ntBASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Mir7051-201ENSMUST00000184167 73 ntBASIC9.74□□□□□ -0.85
Igh-VJ558P01758 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC9.74□□□□□ -0.85
Igh-VJ558P01758 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Gm44315-201ENSMUST00000203041 219 ntBASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Saa-ps-201ENSMUST00000211148 320 ntBASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 AC154532.1-201ENSMUST00000227860 965 ntBASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Igh-VJ558P01758 AC169511.2-201ENSMUST00000226674 2063 ntBASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms