Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cxcl13O55038 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cxcl13O55038 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cxcl13O55038 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cxcl13O55038 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC9.56□□□□□ -0.88
Cxcl13O55038 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC9.56□□□□□ -0.88
Cxcl13O55038 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cxcl13O55038 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cxcl13O55038 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cxcl13O55038 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cxcl13O55038 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cxcl13O55038 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cxcl13O55038 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cxcl13O55038 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC9.56□□□□□ -0.88
Cxcl13O55038 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC9.56□□□□□ -0.88
Cxcl13O55038 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cxcl13O55038 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cxcl13O55038 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cxcl13O55038 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cxcl13O55038 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cxcl13O55038 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Cxcl13O55038 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cxcl13O55038 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC9.55□□□□□ -0.88
Cxcl13O55038 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cxcl13O55038 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cxcl13O55038 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC9.55□□□□□ -0.88
Cxcl13O55038 AC166574.4-201ENSMUST00000227165 1937 ntBASIC9.55□□□□□ -0.88
Cxcl13O55038 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cxcl13O55038 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cxcl13O55038 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC9.55□□□□□ -0.88
Cxcl13O55038 Gm4993-201ENSMUST00000118719 1174 ntBASIC9.55□□□□□ -0.88
Cxcl13O55038 Gm6322-201ENSMUST00000118789 1004 ntBASIC9.55□□□□□ -0.88
Cxcl13O55038 Gm4917-201ENSMUST00000121452 650 ntBASIC9.55□□□□□ -0.88
Cxcl13O55038 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cxcl13O55038 Gm16030-201ENSMUST00000159098 603 ntBASIC9.55□□□□□ -0.88
Cxcl13O55038 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cxcl13O55038 Mrip-ps-201ENSMUST00000184613 940 ntBASIC9.55□□□□□ -0.88
Cxcl13O55038 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cxcl13O55038 Gm18776-201ENSMUST00000188833 654 ntBASIC9.55□□□□□ -0.88
Cxcl13O55038 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cxcl13O55038 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Cxcl13O55038 Gm10254-201ENSMUST00000052888 867 ntBASIC9.55□□□□□ -0.88
Cxcl13O55038 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Cxcl13O55038 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC9.55□□□□□ -0.88
Cxcl13O55038 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cxcl13O55038 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cxcl13O55038 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC9.55□□□□□ -0.88
Cxcl13O55038 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cxcl13O55038 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Cxcl13O55038 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cxcl13O55038 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cxcl13O55038 Gm42943-201ENSMUST00000199676 3242 ntBASIC9.55□□□□□ -0.88
Cxcl13O55038 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC9.55□□□□□ -0.88
Cxcl13O55038 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cxcl13O55038 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Cxcl13O55038 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cxcl13O55038 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cxcl13O55038 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cxcl13O55038 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cxcl13O55038 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cxcl13O55038 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cxcl13O55038 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cxcl13O55038 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cxcl13O55038 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cxcl13O55038 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cxcl13O55038 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
Cxcl13O55038 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cxcl13O55038 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cxcl13O55038 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cxcl13O55038 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cxcl13O55038 Gm43127-201ENSMUST00000195890 2789 ntBASIC9.54□□□□□ -0.88
Cxcl13O55038 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cxcl13O55038 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cxcl13O55038 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cxcl13O55038 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cxcl13O55038 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cxcl13O55038 Gm43152-201ENSMUST00000202495 1638 ntBASIC9.54□□□□□ -0.88
Cxcl13O55038 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cxcl13O55038 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cxcl13O55038 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cxcl13O55038 Snord17-201ENSMUST00000104526 238 ntBASIC9.54□□□□□ -0.88
Cxcl13O55038 Gm11560-201ENSMUST00000117567 948 ntBASIC9.54□□□□□ -0.88
Cxcl13O55038 Selenot-ps-201ENSMUST00000119098 593 ntBASIC9.54□□□□□ -0.88
Cxcl13O55038 Gm11340-201ENSMUST00000119226 412 ntBASIC9.54□□□□□ -0.88
Cxcl13O55038 Mup-ps29-201ENSMUST00000122281 202 ntBASIC9.54□□□□□ -0.88
Cxcl13O55038 Mir1905-201ENSMUST00000122779 82 ntBASIC9.54□□□□□ -0.88
Cxcl13O55038 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC9.54□□□□□ -0.88
Cxcl13O55038 Gm24248-201ENSMUST00000157321 322 ntBASIC9.54□□□□□ -0.88
Cxcl13O55038 Gm17192-201ENSMUST00000169031 511 ntBASIC9.54□□□□□ -0.88
Cxcl13O55038 Gm4753-201ENSMUST00000188327 1255 ntBASIC9.54□□□□□ -0.88
Cxcl13O55038 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC9.54□□□□□ -0.88
Cxcl13O55038 Gm19817-201ENSMUST00000199764 2132 ntBASIC9.54□□□□□ -0.88
Cxcl13O55038 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC9.54□□□□□ -0.88
Cxcl13O55038 Gm6423-201ENSMUST00000204315 934 ntBASIC9.54□□□□□ -0.88
Cxcl13O55038 Id2-203ENSMUST00000222667 958 ntBASIC9.54□□□□□ -0.88
Cxcl13O55038 AC154572.1-201ENSMUST00000226098 1204 ntBASIC9.54□□□□□ -0.88
Cxcl13O55038 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC9.54□□□□□ -0.88
Cxcl13O55038 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Cxcl13O55038 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cxcl13O55038 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms