Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc180J3QNE4 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC20.34■□□□□ 0.85
Ccdc180J3QNE4 Gm23604-201ENSMUST00000104311 132 ntBASIC20.34■□□□□ 0.85
Ccdc180J3QNE4 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC20.34■□□□□ 0.85
Ccdc180J3QNE4 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Ccdc180J3QNE4 Gm12136-201ENSMUST00000120460 1209 ntBASIC20.34■□□□□ 0.85
Ccdc180J3QNE4 Gm24943-201ENSMUST00000158329 433 ntBASIC20.34■□□□□ 0.85
Ccdc180J3QNE4 Gm7047-201ENSMUST00000196224 1063 ntBASIC20.34■□□□□ 0.85
Ccdc180J3QNE4 Gm8234-201ENSMUST00000198523 1107 ntBASIC20.34■□□□□ 0.85
Ccdc180J3QNE4 Gm44640-201ENSMUST00000206894 247 ntBASIC20.34■□□□□ 0.85
Ccdc180J3QNE4 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ccdc180J3QNE4 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC20.34■□□□□ 0.85
Ccdc180J3QNE4 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc180J3QNE4 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc180J3QNE4 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ccdc180J3QNE4 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Ccdc180J3QNE4 Gm37931-201ENSMUST00000194686 2866 ntBASIC20.34■□□□□ 0.85
Ccdc180J3QNE4 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc180J3QNE4 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc180J3QNE4 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc180J3QNE4 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc180J3QNE4 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Ccdc180J3QNE4 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc180J3QNE4 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc180J3QNE4 Gm11919-201ENSMUST00000117609 721 ntBASIC20.33■□□□□ 0.85
Ccdc180J3QNE4 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc180J3QNE4 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc180J3QNE4 Gm7183-201ENSMUST00000213870 1005 ntBASIC20.33■□□□□ 0.85
Ccdc180J3QNE4 AC105408.1-201ENSMUST00000227771 802 ntBASIC20.33■□□□□ 0.85
Ccdc180J3QNE4 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc180J3QNE4 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc180J3QNE4 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC20.33■□□□□ 0.85
Ccdc180J3QNE4 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC20.33■□□□□ 0.85
Ccdc180J3QNE4 Gm18806-201ENSMUST00000207607 1775 ntBASIC20.33■□□□□ 0.84
Ccdc180J3QNE4 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ccdc180J3QNE4 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC20.33■□□□□ 0.84
Ccdc180J3QNE4 Gm5472-201ENSMUST00000178604 1678 ntBASIC20.33■□□□□ 0.84
Ccdc180J3QNE4 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 Gm16288-201ENSMUST00000137940 367 ntBASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 Gm5808-201ENSMUST00000178090 357 ntBASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 AC134793.1-202ENSMUST00000227444 803 ntBASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 AC158986.2-201ENSMUST00000227487 618 ntBASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 Gm9544-201ENSMUST00000223349 2482 ntBASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 Deup1-203ENSMUST00000115593 3019 ntTSL 5 BASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 Gm37058-201ENSMUST00000193393 1644 ntBASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 Gm12947-201ENSMUST00000116114 420 ntBASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 AC160929.1-201ENSMUST00000221247 415 ntBASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc180J3QNE4 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 Gm23439-201ENSMUST00000104292 132 ntBASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 Gm43460-201ENSMUST00000202491 1057 ntBASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 Wbp1-209ENSMUST00000205023 716 ntBASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 Gm6478-201ENSMUST00000099450 742 ntBASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Ccdc180J3QNE4 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ccdc180J3QNE4 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc180J3QNE4 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc180J3QNE4 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Ccdc180J3QNE4 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc180J3QNE4 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms