Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 AC141438.2-201ENSMUST00000215068 271 ntBASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cpsf4lE9Q2N0 Gm42706-201ENSMUST00000199733 1910 ntBASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Gm9550-201ENSMUST00000161130 862 ntBASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Gm37986-201ENSMUST00000193285 383 ntBASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Gm43520-201ENSMUST00000197996 164 ntBASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Gm45770-201ENSMUST00000212105 616 ntBASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 AC153505.1-201ENSMUST00000218819 1071 ntBASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Gm19046-201ENSMUST00000221263 1298 ntBASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 AC154257.1-202ENSMUST00000224729 843 ntBASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Gm14267-206ENSMUST00000226870 1209 ntBASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Gm45206-201ENSMUST00000206885 2285 ntBASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cpsf4lE9Q2N0 Gm43972-201ENSMUST00000181398 1467 ntBASIC9.53□□□□□ -0.88
Cpsf4lE9Q2N0 Gm37651-201ENSMUST00000194679 1494 ntBASIC9.53□□□□□ -0.88
Cpsf4lE9Q2N0 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Cpsf4lE9Q2N0 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cpsf4lE9Q2N0 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cpsf4lE9Q2N0 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cpsf4lE9Q2N0 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cpsf4lE9Q2N0 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cpsf4lE9Q2N0 Gm43152-201ENSMUST00000202495 1638 ntBASIC9.53□□□□□ -0.88
Cpsf4lE9Q2N0 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cpsf4lE9Q2N0 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms