Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chd2E9PZM4 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chd2E9PZM4 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Gm38227-201ENSMUST00000193036 1602 ntBASIC15.13■□□□□ 0.01
Chd2E9PZM4 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Gm3283-201ENSMUST00000199319 1350 ntBASIC15.13■□□□□ 0.01
Chd2E9PZM4 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Gm5046-201ENSMUST00000100608 611 ntBASIC15.13■□□□□ 0.01
Chd2E9PZM4 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Gm44805-201ENSMUST00000127648 765 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Chd2E9PZM4 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chd2E9PZM4 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Chd2E9PZM4 B130024G19Rik-204ENSMUST00000191084 634 ntTSL 5 BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC15.13■□□□□ 0.01
Chd2E9PZM4 AC151971.6-201ENSMUST00000216193 866 ntBASIC15.13■□□□□ 0.01
Chd2E9PZM4 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd2E9PZM4 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC15.13■□□□□ 0.01
Chd2E9PZM4 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chd2E9PZM4 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chd2E9PZM4 H2afy3-201ENSMUST00000151919 1112 ntBASIC15.13■□□□□ 0.01
Chd2E9PZM4 Gm23916-201ENSMUST00000158484 399 ntBASIC15.13■□□□□ 0.01
Chd2E9PZM4 Gm26611-201ENSMUST00000181449 785 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Gm18182-201ENSMUST00000191380 1251 ntBASIC15.13■□□□□ 0.01
Chd2E9PZM4 Gm5845-201ENSMUST00000195812 796 ntBASIC15.13■□□□□ 0.01
Chd2E9PZM4 Crip1-205ENSMUST00000199089 509 ntTSL 3 BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC15.13■□□□□ 0.01
Chd2E9PZM4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd2E9PZM4 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Vps45-201ENSMUST00000015891 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Gm5071-201ENSMUST00000104922 1035 ntBASIC15.12■□□□□ 0.01
Chd2E9PZM4 Faap24-203ENSMUST00000154597 831 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Gm23479-201ENSMUST00000158876 122 ntBASIC15.12■□□□□ 0.01
Chd2E9PZM4 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC15.12■□□□□ 0.01
Chd2E9PZM4 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd2E9PZM4 AC154640.1-203ENSMUST00000228316 1618 ntBASIC15.12■□□□□ 0.01
Chd2E9PZM4 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd2E9PZM4 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd2E9PZM4 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd2E9PZM4 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd2E9PZM4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd2E9PZM4 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chd2E9PZM4 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chd2E9PZM4 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC15.11■□□□□ 0.01
Chd2E9PZM4 Gm29157-201ENSMUST00000188753 612 ntBASIC15.11■□□□□ 0.01
Chd2E9PZM4 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chd2E9PZM4 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd2E9PZM4 Gm8420-201ENSMUST00000097103 598 ntBASIC15.11■□□□□ 0.01
Chd2E9PZM4 Gm38246-201ENSMUST00000194318 1511 ntBASIC15.11■□□□□ 0.01
Chd2E9PZM4 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd2E9PZM4 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Chd2E9PZM4 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chd2E9PZM4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd2E9PZM4 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd2E9PZM4 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd2E9PZM4 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chd2E9PZM4 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms