Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm14348-201ENSMUST00000179183 868 ntBASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gm26810-201ENSMUST00000181153 1106 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gm29434-201ENSMUST00000187426 260 ntBASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC5.78□□□□□ -1.48
Ubr4A2AN08 Gm29725-201ENSMUST00000206614 407 ntBASIC5.78□□□□□ -1.48
Ubr4A2AN08 AC126939.2-201ENSMUST00000225989 307 ntBASIC5.78□□□□□ -1.48
Ubr4A2AN08 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.48
Ubr4A2AN08 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.48
Ubr4A2AN08 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 AC154186.1-201ENSMUST00000227711 1597 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Ubr4A2AN08 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Rgs9-204ENSMUST00000106706 2313 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Trex1-202ENSMUST00000112053 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm12004-201ENSMUST00000117869 718 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm12746-201ENSMUST00000151369 615 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm15841-201ENSMUST00000160540 517 ntTSL 3 BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm26241-201ENSMUST00000174944 101 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm23976-201ENSMUST00000175001 101 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm22463-201ENSMUST00000175274 101 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm22547-201ENSMUST00000175281 101 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm22913-201ENSMUST00000175297 101 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm23282-201ENSMUST00000175306 101 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm25972-201ENSMUST00000175374 101 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm22414-201ENSMUST00000175466 101 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm26235-201ENSMUST00000175533 101 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm25084-201ENSMUST00000175556 101 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm24973-201ENSMUST00000175588 101 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm23292-201ENSMUST00000175618 101 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm23646-201ENSMUST00000178119 101 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm24643-201ENSMUST00000178305 101 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm24302-201ENSMUST00000178350 101 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm26386-201ENSMUST00000178407 101 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm25458-201ENSMUST00000178981 101 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm22825-201ENSMUST00000179444 101 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm19566-201ENSMUST00000199576 610 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm6579-201ENSMUST00000208224 865 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Olfr518-201ENSMUST00000059617 1002 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Scp2-ps2-201ENSMUST00000072166 478 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm26397-201ENSMUST00000083703 134 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC5.77□□□□□ -1.49
Ubr4A2AN08 AC137842.1-201ENSMUST00000227896 2064 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Snhg17-202ENSMUST00000138592 342 ntTSL 2 BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Plgrkt-208ENSMUST00000143467 1020 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm22530-201ENSMUST00000158820 118 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm26436-201ENSMUST00000180325 132 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm20587-201ENSMUST00000186367 1186 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm8143-201ENSMUST00000203654 1186 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 AC140426.1-201ENSMUST00000227933 459 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Sncg-201ENSMUST00000023826 852 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm4925-201ENSMUST00000092231 397 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm14005-209ENSMUST00000224993 1832 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm43622-201ENSMUST00000200140 2019 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Ndufa9-203ENSMUST00000205002 1445 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Sdcbp2-201ENSMUST00000028950 1399 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm1758-201ENSMUST00000164528 606 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm6686-201ENSMUST00000178455 258 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 3300005D01Rik-204ENSMUST00000181484 1174 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm5960-201ENSMUST00000188483 406 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Gm3889-201ENSMUST00000212467 612 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Vmn1r191-201ENSMUST00000072369 897 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
Ubr4A2AN08 AC187103.1-202ENSMUST00000223904 1536 ntBASIC5.77□□□□□ -1.49
Ubr4A2AN08 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ubr4A2AN08 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms