Protein–RNA interactions for Protein: Q9Z1N5

Ddx39b, Spliceosome RNA helicase Ddx39b, mousemouse

Known RBP Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39bQ9Z1N5 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Gm12247-201ENSMUST00000117585 670 ntBASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Gm10807-201ENSMUST00000177134 795 ntBASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Gm5996-201ENSMUST00000211110 718 ntBASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Gm1821-202ENSMUST00000227415 750 ntBASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Btrc-209ENSMUST00000224478 2194 ntBASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ddx39bQ9Z1N5 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Gm13809-201ENSMUST00000117921 597 ntBASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Gm7857-201ENSMUST00000117957 358 ntBASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Gm7504-201ENSMUST00000201449 424 ntBASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ddx39bQ9Z1N5 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx39bQ9Z1N5 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx39bQ9Z1N5 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ddx39bQ9Z1N5 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ddx39bQ9Z1N5 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx39bQ9Z1N5 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx39bQ9Z1N5 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx39bQ9Z1N5 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
Ddx39bQ9Z1N5 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.31□□□□□ -0.6
Ddx39bQ9Z1N5 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ddx39bQ9Z1N5 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx39bQ9Z1N5 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Ddx39bQ9Z1N5 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC11.31□□□□□ -0.6
Ddx39bQ9Z1N5 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx39bQ9Z1N5 Gm15595-201ENSMUST00000120840 961 ntBASIC11.31□□□□□ -0.6
Ddx39bQ9Z1N5 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.31□□□□□ -0.6
Ddx39bQ9Z1N5 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx39bQ9Z1N5 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx39bQ9Z1N5 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms