Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn9Q9Z0S7 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 BC043934-202ENSMUST00000185694 2356 ntBASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Gm4909-201ENSMUST00000118749 794 ntBASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Gm15374-201ENSMUST00000119313 844 ntBASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Gm25732-201ENSMUST00000175168 60 ntBASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn9Q9Z0S7 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 CT573047.1-201ENSMUST00000223652 851 ntBASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Olfr584-201ENSMUST00000098210 964 ntBASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cldn9Q9Z0S7 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Cldn9Q9Z0S7 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms