Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Sec61a2Q9JLR1 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Gm23251-201ENSMUST00000103773 110 ntBASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Gm7851-201ENSMUST00000117574 323 ntBASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Gm14071-201ENSMUST00000117817 509 ntBASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Gm14724-201ENSMUST00000118400 537 ntBASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Gm13461-201ENSMUST00000120980 662 ntBASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Gm28196-201ENSMUST00000187719 640 ntBASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Gm18753-201ENSMUST00000201000 566 ntBASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Gm45113-201ENSMUST00000207518 165 ntBASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sec61a2Q9JLR1 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a2Q9JLR1 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Sec61a2Q9JLR1 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a2Q9JLR1 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a2Q9JLR1 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Sec61a2Q9JLR1 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a2Q9JLR1 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sec61a2Q9JLR1 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.21□□□□□ -0.78
Sec61a2Q9JLR1 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.78
Sec61a2Q9JLR1 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Gm24891-201ENSMUST00000104391 136 ntBASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Gm11331-201ENSMUST00000119764 288 ntBASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Gm5714-201ENSMUST00000197343 566 ntBASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Gm4482-201ENSMUST00000200876 742 ntBASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Gm9785-201ENSMUST00000062642 1006 ntBASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sec61a2Q9JLR1 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms