Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.09□□□□□ -0.79
Trem1Q9JKE2 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.09□□□□□ -0.79
Trem1Q9JKE2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Trem1Q9JKE2 Mpo-201ENSMUST00000020779 2750 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trem1Q9JKE2 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trem1Q9JKE2 Scrn3-201ENSMUST00000090811 3309 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trem1Q9JKE2 Gm6170-201ENSMUST00000187672 1388 ntBASIC10.09□□□□□ -0.79
Trem1Q9JKE2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trem1Q9JKE2 Dhx32-202ENSMUST00000063669 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trem1Q9JKE2 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trem1Q9JKE2 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trem1Q9JKE2 Rab36-207ENSMUST00000147802 3291 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Trem1Q9JKE2 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Trem1Q9JKE2 AC117245.4-202ENSMUST00000214403 3816 ntTSL 5 BASIC10.09□□□□□ -0.79
Trem1Q9JKE2 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Trem1Q9JKE2 Enthd1-201ENSMUST00000096347 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trem1Q9JKE2 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Trem1Q9JKE2 Nrep-201ENSMUST00000051087 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trem1Q9JKE2 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trem1Q9JKE2 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Gm21969-201ENSMUST00000178644 4402 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Gm44510-201ENSMUST00000206288 4532 ntBASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 1700006J14Rik-203ENSMUST00000160091 2629 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 1700126A01Rik-201ENSMUST00000185283 2061 ntBASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Gcm1-201ENSMUST00000024104 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.08□□□□□ -0.8
Trem1Q9JKE2 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Acox3-201ENSMUST00000068563 3386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Gm7932-202ENSMUST00000205047 2194 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Gm13615-201ENSMUST00000120242 1612 ntBASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 1700001J11Rik-202ENSMUST00000190330 2463 ntBASIC10.08□□□□□ -0.8
Trem1Q9JKE2 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Ctc1-201ENSMUST00000021278 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 C7-201ENSMUST00000110689 2676 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Gm24830-201ENSMUST00000102024 166 ntBASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Gm24196-201ENSMUST00000179161 110 ntBASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Mir6977-201ENSMUST00000184960 64 ntBASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Gm9908-201ENSMUST00000211534 448 ntBASIC10.08□□□□□ -0.8
Trem1Q9JKE2 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Gm26232-201ENSMUST00000083360 166 ntBASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Aqp7-201ENSMUST00000030136 2527 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Prim1-201ENSMUST00000026461 1583 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Gm45170-201ENSMUST00000206746 1671 ntBASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Gm28775-201ENSMUST00000186918 2167 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Zfp942-202ENSMUST00000091879 3265 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trem1Q9JKE2 Nkd1-202ENSMUST00000169179 4081 ntTSL 2 BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Zfp385b-201ENSMUST00000090766 2740 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Zmpste24-201ENSMUST00000058754 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Cdkn1b-202ENSMUST00000067327 4552 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 AC159813.1-201ENSMUST00000222671 2263 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Stoml3-201ENSMUST00000029307 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms