Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Gm18776-201ENSMUST00000188833 654 ntBASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Gm29067-201ENSMUST00000190821 470 ntBASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Gm44008-201ENSMUST00000204345 412 ntBASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Gm5599-201ENSMUST00000209602 788 ntBASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Gm45856-201ENSMUST00000212752 416 ntBASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.28□□□□□ -0.44
Trim54Q9ERP3 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.28□□□□□ -0.44
Trim54Q9ERP3 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.27□□□□□ -0.44
Trim54Q9ERP3 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim54Q9ERP3 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Trim54Q9ERP3 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim54Q9ERP3 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim54Q9ERP3 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim54Q9ERP3 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trim54Q9ERP3 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim54Q9ERP3 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim54Q9ERP3 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim54Q9ERP3 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Trim54Q9ERP3 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Gm12179-201ENSMUST00000118344 1272 ntBASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Gm9673-201ENSMUST00000119287 781 ntBASIC12.27□□□□□ -0.45
Trim54Q9ERP3 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Gm43671-201ENSMUST00000200422 433 ntBASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Gm9111-201ENSMUST00000219394 709 ntBASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim54Q9ERP3 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim54Q9ERP3 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim54Q9ERP3 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim54Q9ERP3 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Gm24248-201ENSMUST00000157321 322 ntBASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Gm28833-201ENSMUST00000189671 559 ntBASIC12.26□□□□□ -0.45
Trim54Q9ERP3 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms