Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.77□□□□□ -0.53
Cpne8Q9DC53 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Gm11941-201ENSMUST00000119904 610 ntBASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Gm11836-201ENSMUST00000121022 441 ntBASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.76□□□□□ -0.53
Cpne8Q9DC53 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Gm44506-201ENSMUST00000206278 965 ntBASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Ginm1-202ENSMUST00000065124 300 ntBASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cpne8Q9DC53 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Rgr-203ENSMUST00000225070 4704 ntBASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Gm15236-201ENSMUST00000117309 379 ntBASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Gm11244-201ENSMUST00000121243 237 ntBASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Gm25492-201ENSMUST00000157383 129 ntBASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Gm2517-201ENSMUST00000215651 348 ntBASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne8Q9DC53 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.74□□□□□ -0.53
Cpne8Q9DC53 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms