Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Gm15374-201ENSMUST00000119313 844 ntBASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Gm13019-201ENSMUST00000120000 276 ntBASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Gm11502-201ENSMUST00000120917 1211 ntBASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Gm25677-201ENSMUST00000174983 72 ntBASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Gm26976-201ENSMUST00000182929 908 ntBASIC11.11□□□□□ -0.63
Rrp8Q9DB85 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rrp8Q9DB85 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Gm12389-201ENSMUST00000117696 418 ntBASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Gm9133-201ENSMUST00000118289 540 ntBASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Gm13284-201ENSMUST00000121020 547 ntBASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Gm34379-201ENSMUST00000195036 290 ntBASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Gm44814-201ENSMUST00000207018 434 ntBASIC11.1□□□□□ -0.63
Rrp8Q9DB85 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Gm7525-201ENSMUST00000219425 454 ntBASIC11.1□□□□□ -0.63
Rrp8Q9DB85 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Gm10020-201ENSMUST00000081993 612 ntBASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Smok4a-201ENSMUST00000074512 1455 ntBASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rrp8Q9DB85 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms