Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Gm14585-201ENSMUST00000120713 634 ntBASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Gm8737-201ENSMUST00000122208 642 ntBASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Gm5523-201ENSMUST00000180415 997 ntBASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Gm9645-201ENSMUST00000197131 792 ntBASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Gm43966-201ENSMUST00000203301 612 ntBASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2aQ9DB34 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Gm17391-201ENSMUST00000171036 126 ntBASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp2aQ9DB34 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Gm12029-201ENSMUST00000120073 832 ntBASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Gm12176-201ENSMUST00000121420 875 ntBASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Gm45398-201ENSMUST00000210561 165 ntBASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms