Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Gm27341-201ENSMUST00000183570 106 ntBASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Chmp4cQ9D7F7 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 AC122273.1-201ENSMUST00000213634 2327 ntBASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Gm11439-201ENSMUST00000118598 409 ntBASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Gm14277-201ENSMUST00000121195 360 ntBASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Gm8459-201ENSMUST00000162504 760 ntBASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Gm18734-201ENSMUST00000172937 808 ntBASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Gm18730-201ENSMUST00000218038 343 ntBASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Gm10288-201ENSMUST00000084614 537 ntBASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 AC167565.1-201ENSMUST00000226980 1833 ntBASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp4cQ9D7F7 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Gm6124-201ENSMUST00000188240 2580 ntBASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Gm8199-201ENSMUST00000121323 823 ntBASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Gm3329-201ENSMUST00000159873 556 ntBASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Gm2383-201ENSMUST00000181461 807 ntBASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Gm27552-201ENSMUST00000183351 62 ntBASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Gm27844-201ENSMUST00000183613 62 ntBASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Gm28450-201ENSMUST00000187349 638 ntBASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Gm4857-201ENSMUST00000192718 785 ntBASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Gm5714-201ENSMUST00000197343 566 ntBASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms