Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Snx29Q9D3S3 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Snx29Q9D3S3 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snx29Q9D3S3 Gm14005-210ENSMUST00000225087 1413 ntBASIC12.43□□□□□ -0.42
Snx29Q9D3S3 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.43□□□□□ -0.42
Snx29Q9D3S3 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.43□□□□□ -0.42
Snx29Q9D3S3 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.43□□□□□ -0.42
Snx29Q9D3S3 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Snx29Q9D3S3 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Snx29Q9D3S3 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snx29Q9D3S3 Gm5822-201ENSMUST00000161562 1378 ntBASIC12.43□□□□□ -0.42
Snx29Q9D3S3 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snx29Q9D3S3 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Snx29Q9D3S3 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snx29Q9D3S3 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Gm44740-201ENSMUST00000205603 1614 ntBASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Gm22594-201ENSMUST00000104251 130 ntBASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Gm21156-201ENSMUST00000189693 869 ntBASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Gm20781-201ENSMUST00000193154 693 ntBASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Gm21736-201ENSMUST00000195399 693 ntBASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snx29Q9D3S3 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Gm23745-201ENSMUST00000104230 125 ntBASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Gm25116-201ENSMUST00000157191 122 ntBASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Gm25226-201ENSMUST00000158198 123 ntBASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Gm45085-201ENSMUST00000209100 441 ntBASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Gm40879-201ENSMUST00000220759 612 ntBASIC12.41□□□□□ -0.42
Snx29Q9D3S3 CT025618.1-203ENSMUST00000227008 589 ntBASIC12.41□□□□□ -0.42
Snx29Q9D3S3 AC137871.1-201ENSMUST00000228278 475 ntBASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snx29Q9D3S3 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 283.5 ms