Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 AC158392.3-201ENSMUST00000224271 1284 ntBASIC13.5□□□□□ -0.25
Stag1Q9D3E6 AC154361.2-201ENSMUST00000224747 943 ntBASIC13.5□□□□□ -0.25
Stag1Q9D3E6 AC156501.1-201ENSMUST00000228219 270 ntBASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Stag1Q9D3E6 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Gm25343-201ENSMUST00000157460 107 ntBASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Gm25830-201ENSMUST00000158923 132 ntBASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Gm4982-201ENSMUST00000160440 1098 ntBASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Gm17889-201ENSMUST00000198410 598 ntBASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Gm6390-201ENSMUST00000215034 589 ntBASIC13.49□□□□□ -0.25
Stag1Q9D3E6 AC122024.3-201ENSMUST00000217719 294 ntBASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Gm7525-201ENSMUST00000219425 454 ntBASIC13.49□□□□□ -0.25
Stag1Q9D3E6 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Id2-203ENSMUST00000222667 958 ntBASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Gm10254-201ENSMUST00000052888 867 ntBASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Stag1Q9D3E6 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Stag1Q9D3E6 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Stag1Q9D3E6 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Stag1Q9D3E6 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Stag1Q9D3E6 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Stag1Q9D3E6 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Stag1Q9D3E6 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Stag1Q9D3E6 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Stag1Q9D3E6 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Stag1Q9D3E6 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Stag1Q9D3E6 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Stag1Q9D3E6 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Stag1Q9D3E6 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Stag1Q9D3E6 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Stag1Q9D3E6 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Stag1Q9D3E6 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC13.48□□□□□ -0.25
Stag1Q9D3E6 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC13.48□□□□□ -0.25
Stag1Q9D3E6 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.48□□□□□ -0.25
Stag1Q9D3E6 Gm3433-201ENSMUST00000210149 1058 ntBASIC13.48□□□□□ -0.25
Stag1Q9D3E6 CT030166.5-201ENSMUST00000222249 420 ntBASIC13.48□□□□□ -0.25
Stag1Q9D3E6 AC130477.1-201ENSMUST00000226982 420 ntBASIC13.48□□□□□ -0.25
Stag1Q9D3E6 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Stag1Q9D3E6 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.48□□□□□ -0.25
Stag1Q9D3E6 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Stag1Q9D3E6 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Stag1Q9D3E6 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Stag1Q9D3E6 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.48□□□□□ -0.25
Stag1Q9D3E6 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Stag1Q9D3E6 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Stag1Q9D3E6 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms