Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trim13Q9CYB0 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trim13Q9CYB0 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim13Q9CYB0 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim13Q9CYB0 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim13Q9CYB0 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim13Q9CYB0 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trim13Q9CYB0 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim13Q9CYB0 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim13Q9CYB0 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trim13Q9CYB0 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Trim13Q9CYB0 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Gm15198-201ENSMUST00000117283 177 ntBASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Gm11500-201ENSMUST00000118237 601 ntBASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Gm11660-201ENSMUST00000120955 412 ntBASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Gm5455-201ENSMUST00000058710 715 ntBASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trim13Q9CYB0 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Gm15547-201ENSMUST00000122152 333 ntBASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Gm3329-201ENSMUST00000159873 556 ntBASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.46□□□□□ -0.73
Trim13Q9CYB0 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trim13Q9CYB0 Gm5070-201ENSMUST00000177599 862 ntBASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms