Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.88□□□□□ -0.67
Otud1Q9CUB6 AC159103.1-201ENSMUST00000228325 429 ntBASIC10.88□□□□□ -0.67
Otud1Q9CUB6 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Otud1Q9CUB6 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Otud1Q9CUB6 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Otud1Q9CUB6 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Otud1Q9CUB6 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Otud1Q9CUB6 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Otud1Q9CUB6 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Otud1Q9CUB6 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Otud1Q9CUB6 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Otud1Q9CUB6 Gm38325-201ENSMUST00000194507 1377 ntBASIC10.88□□□□□ -0.67
Otud1Q9CUB6 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Otud1Q9CUB6 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Otud1Q9CUB6 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Otud1Q9CUB6 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Olfr362-201ENSMUST00000100144 954 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Mir706-201ENSMUST00000102262 84 ntBASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Gm15968-201ENSMUST00000119342 1168 ntBASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Gm1848-201ENSMUST00000120711 789 ntBASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Gm23757-201ENSMUST00000158353 100 ntBASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Gm7741-201ENSMUST00000181445 989 ntBASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Gm20854-202ENSMUST00000181549 1156 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Gm3551-201ENSMUST00000190750 664 ntBASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Gm29011-201ENSMUST00000191059 712 ntBASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Gm42619-201ENSMUST00000197564 1136 ntBASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 AC153522.1-201ENSMUST00000220047 1090 ntBASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Gm9661-201ENSMUST00000221611 1122 ntBASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Gm5879-201ENSMUST00000089501 1209 ntBASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otud1Q9CUB6 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Otud1Q9CUB6 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Otud1Q9CUB6 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.86□□□□□ -0.67
Otud1Q9CUB6 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Otud1Q9CUB6 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Otud1Q9CUB6 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.86□□□□□ -0.67
Otud1Q9CUB6 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Otud1Q9CUB6 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Otud1Q9CUB6 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.86□□□□□ -0.67
Otud1Q9CUB6 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Otud1Q9CUB6 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.86□□□□□ -0.67
Otud1Q9CUB6 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Otud1Q9CUB6 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Otud1Q9CUB6 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Otud1Q9CUB6 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Otud1Q9CUB6 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.86□□□□□ -0.67
Otud1Q9CUB6 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Otud1Q9CUB6 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Otud1Q9CUB6 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Otud1Q9CUB6 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Otud1Q9CUB6 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Otud1Q9CUB6 Gm15615-201ENSMUST00000118876 198 ntBASIC10.86□□□□□ -0.67
Otud1Q9CUB6 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC10.86□□□□□ -0.67
Otud1Q9CUB6 Gm12208-201ENSMUST00000122004 163 ntBASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms