Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Gm12097-201ENSMUST00000121523 1414 ntBASIC15.34■□□□□ 0.05
Rtn4Q99P72 CT009718.2-201ENSMUST00000221408 1428 ntTSL 5 BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.34■□□□□ 0.05
Rtn4Q99P72 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4Q99P72 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rtn4Q99P72 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Rtn4Q99P72 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC15.33■□□□□ 0.05
Rtn4Q99P72 Gm42815-201ENSMUST00000198787 1470 ntBASIC15.33■□□□□ 0.05
Rtn4Q99P72 Gm18227-201ENSMUST00000211082 1468 ntBASIC15.33■□□□□ 0.05
Rtn4Q99P72 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rtn4Q99P72 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rtn4Q99P72 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rtn4Q99P72 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rtn4Q99P72 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
Rtn4Q99P72 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Gm21990-201ENSMUST00000124692 383 ntBASIC15.33■□□□□ 0.04
Rtn4Q99P72 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Bcas1os2-201ENSMUST00000131931 1174 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4Q99P72 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Mir3547-201ENSMUST00000175461 88 ntBASIC15.33■□□□□ 0.04
Rtn4Q99P72 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Gm29615-201ENSMUST00000185371 697 ntBASIC15.33■□□□□ 0.04
Rtn4Q99P72 Gm28224-201ENSMUST00000186078 697 ntBASIC15.33■□□□□ 0.04
Rtn4Q99P72 Gm29001-201ENSMUST00000186177 697 ntBASIC15.33■□□□□ 0.04
Rtn4Q99P72 Gm28292-201ENSMUST00000186593 697 ntBASIC15.33■□□□□ 0.04
Rtn4Q99P72 Gm28101-201ENSMUST00000187608 697 ntBASIC15.33■□□□□ 0.04
Rtn4Q99P72 Gm29076-201ENSMUST00000187689 697 ntBASIC15.33■□□□□ 0.04
Rtn4Q99P72 Gm28302-201ENSMUST00000187931 697 ntBASIC15.33■□□□□ 0.04
Rtn4Q99P72 Gm28646-201ENSMUST00000188220 697 ntBASIC15.33■□□□□ 0.04
Rtn4Q99P72 Gm28205-201ENSMUST00000189177 697 ntBASIC15.33■□□□□ 0.04
Rtn4Q99P72 Gm29032-201ENSMUST00000189797 697 ntBASIC15.33■□□□□ 0.04
Rtn4Q99P72 Gm28695-201ENSMUST00000190300 697 ntBASIC15.33■□□□□ 0.04
Rtn4Q99P72 Gm37448-201ENSMUST00000192795 697 ntBASIC15.33■□□□□ 0.04
Rtn4Q99P72 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Gm42997-202ENSMUST00000200321 985 ntBASIC15.33■□□□□ 0.04
Rtn4Q99P72 Gm44156-201ENSMUST00000203885 1189 ntBASIC15.33■□□□□ 0.04
Rtn4Q99P72 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Gm18026-201ENSMUST00000222789 727 ntBASIC15.33■□□□□ 0.04
Rtn4Q99P72 AC154594.1-201ENSMUST00000225171 1273 ntBASIC15.33■□□□□ 0.04
Rtn4Q99P72 AC154640.1-204ENSMUST00000227105 648 ntBASIC15.33■□□□□ 0.04
Rtn4Q99P72 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Rtn4Q99P72 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC15.33■□□□□ 0.04
Rtn4Q99P72 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rtn4Q99P72 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.32■□□□□ 0.04
Rtn4Q99P72 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC15.32■□□□□ 0.04
Rtn4Q99P72 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4Q99P72 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4Q99P72 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4Q99P72 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4Q99P72 Adra1a-206ENSMUST00000225182 2337 ntBASIC15.32■□□□□ 0.04
Rtn4Q99P72 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4Q99P72 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4Q99P72 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4Q99P72 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4Q99P72 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC15.32■□□□□ 0.04
Rtn4Q99P72 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Rtn4Q99P72 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC15.32■□□□□ 0.04
Rtn4Q99P72 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC15.32■□□□□ 0.04
Rtn4Q99P72 Cfhr3-201ENSMUST00000170441 1022 ntBASIC15.32■□□□□ 0.04
Rtn4Q99P72 Gm25732-201ENSMUST00000175168 60 ntBASIC15.32■□□□□ 0.04
Rtn4Q99P72 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4Q99P72 2610020F03Rik-201ENSMUST00000180401 588 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rtn4Q99P72 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rtn4Q99P72 Gm28060-201ENSMUST00000191554 189 ntBASIC15.32■□□□□ 0.04
Rtn4Q99P72 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC15.32■□□□□ 0.04
Rtn4Q99P72 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
Rtn4Q99P72 Gm43093-201ENSMUST00000202439 1213 ntBASIC15.32■□□□□ 0.04
Rtn4Q99P72 Gm44694-201ENSMUST00000205317 1298 ntBASIC15.32■□□□□ 0.04
Rtn4Q99P72 Gm10109-202ENSMUST00000206890 1211 ntBASIC15.32■□□□□ 0.04
Rtn4Q99P72 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms