Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm23596-201ENSMUST00000104304 132 ntBASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Gm12857-201ENSMUST00000117678 592 ntBASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Gm14130-201ENSMUST00000118417 987 ntBASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Gm15711-201ENSMUST00000118889 535 ntBASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Gm17376-201ENSMUST00000166016 84 ntBASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Gm3332-201ENSMUST00000189337 928 ntBASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Gm6439-201ENSMUST00000199849 862 ntBASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Gm6082-201ENSMUST00000215204 454 ntBASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Olfr582-201ENSMUST00000098212 960 ntBASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkd1Q99MH6 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Gm15198-201ENSMUST00000117283 177 ntBASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Gm24749-201ENSMUST00000157838 343 ntBASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Gm8815-201ENSMUST00000173809 620 ntBASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Gm43275-201ENSMUST00000202053 1020 ntBASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Gm4978-201ENSMUST00000071565 801 ntBASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Nkd1Q99MH6 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nkd1Q99MH6 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nkd1Q99MH6 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nkd1Q99MH6 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Nkd1Q99MH6 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nkd1Q99MH6 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Nkd1Q99MH6 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nkd1Q99MH6 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.71
Nkd1Q99MH6 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Nkd1Q99MH6 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
Nkd1Q99MH6 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nkd1Q99MH6 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms