Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Gm23085-201ENSMUST00000157849 293 ntBASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Gm45113-201ENSMUST00000207518 165 ntBASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Nsd1-205ENSMUST00000224693 852 ntBASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Gm43289-201ENSMUST00000200537 1475 ntBASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.72□□□□□ -0.69
Chmp1b1Q99LU0 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Gm27552-201ENSMUST00000183351 62 ntBASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Gm27844-201ENSMUST00000183613 62 ntBASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Gm5714-201ENSMUST00000197343 566 ntBASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Gm43002-201ENSMUST00000200310 155 ntBASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Gm44136-201ENSMUST00000203819 1106 ntBASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Gm18065-201ENSMUST00000221395 526 ntBASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Chmp1b1Q99LU0 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Chmp1b1Q99LU0 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Chmp1b1Q99LU0 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Chmp1b1Q99LU0 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Chmp1b1Q99LU0 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.7
Chmp1b1Q99LU0 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Chmp1b1Q99LU0 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Chmp1b1Q99LU0 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Chmp1b1Q99LU0 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Chmp1b1Q99LU0 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Chmp1b1Q99LU0 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Chmp1b1Q99LU0 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms