Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC13.98□□□□□ -0.17
RtcbQ99LF4 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RtcbQ99LF4 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Gm11380-201ENSMUST00000118067 560 ntBASIC13.97□□□□□ -0.17
RtcbQ99LF4 Gm8152-201ENSMUST00000120842 637 ntBASIC13.97□□□□□ -0.17
RtcbQ99LF4 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Gm7880-201ENSMUST00000203748 871 ntBASIC13.97□□□□□ -0.17
RtcbQ99LF4 Gm6518-201ENSMUST00000208450 342 ntBASIC13.97□□□□□ -0.17
RtcbQ99LF4 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC13.97□□□□□ -0.17
RtcbQ99LF4 AC159196.1-201ENSMUST00000225524 377 ntBASIC13.97□□□□□ -0.17
RtcbQ99LF4 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RtcbQ99LF4 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RtcbQ99LF4 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC13.96□□□□□ -0.17
RtcbQ99LF4 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RtcbQ99LF4 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
RtcbQ99LF4 CT025618.1-203ENSMUST00000227008 589 ntBASIC13.96□□□□□ -0.17
RtcbQ99LF4 n-R5s71-201ENSMUST00000093668 119 ntBASIC13.96□□□□□ -0.17
RtcbQ99LF4 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RtcbQ99LF4 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RtcbQ99LF4 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
RtcbQ99LF4 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RtcbQ99LF4 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RtcbQ99LF4 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RtcbQ99LF4 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RtcbQ99LF4 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RtcbQ99LF4 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.96□□□□□ -0.18
RtcbQ99LF4 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RtcbQ99LF4 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RtcbQ99LF4 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
RtcbQ99LF4 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RtcbQ99LF4 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
RtcbQ99LF4 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RtcbQ99LF4 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RtcbQ99LF4 Gm14005-209ENSMUST00000224993 1832 ntBASIC13.95□□□□□ -0.18
RtcbQ99LF4 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RtcbQ99LF4 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RtcbQ99LF4 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RtcbQ99LF4 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RtcbQ99LF4 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RtcbQ99LF4 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
RtcbQ99LF4 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
RtcbQ99LF4 Gm22495-201ENSMUST00000104492 126 ntBASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms