Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Gm42430-201ENSMUST00000197209 616 ntBASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 AC154527.3-201ENSMUST00000225519 989 ntBASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 AC133517.2-201ENSMUST00000226820 690 ntBASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Gm22058-201ENSMUST00000083393 310 ntBASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Gm6714-201ENSMUST00000218677 2330 ntBASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Gm8320-201ENSMUST00000177584 1762 ntBASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Gm8303-201ENSMUST00000178371 1762 ntBASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Gm8331-201ENSMUST00000178433 1762 ntBASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhb3Q91XZ7 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Gm18300-201ENSMUST00000192792 1406 ntBASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Ifna13-201ENSMUST00000105149 819 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Gm15236-201ENSMUST00000117309 379 ntBASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Gm13316-201ENSMUST00000140537 691 ntBASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Gm20482-202ENSMUST00000174729 825 ntBASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Gm22906-201ENSMUST00000175191 250 ntBASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Gm26619-201ENSMUST00000180396 1073 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Gm20854-202ENSMUST00000181549 1156 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Gm28926-201ENSMUST00000191063 680 ntBASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhb3Q91XZ7 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Gm37234-201ENSMUST00000193259 1441 ntBASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Pcdhb3Q91XZ7 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms