Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.93□□□□□ -0.34
Trex1Q91XB0 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Gm16165-201ENSMUST00000160140 795 ntBASIC12.93□□□□□ -0.34
Trex1Q91XB0 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Gm31274-201ENSMUST00000197356 229 ntBASIC12.93□□□□□ -0.34
Trex1Q91XB0 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trex1Q91XB0 AC140375.1-201ENSMUST00000225421 694 ntBASIC12.93□□□□□ -0.34
Trex1Q91XB0 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Gm10254-201ENSMUST00000052888 867 ntBASIC12.93□□□□□ -0.34
Trex1Q91XB0 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trex1Q91XB0 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trex1Q91XB0 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.92□□□□□ -0.34
Trex1Q91XB0 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trex1Q91XB0 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Gm14274-201ENSMUST00000117182 615 ntBASIC12.92□□□□□ -0.34
Trex1Q91XB0 Gm11996-201ENSMUST00000117538 915 ntBASIC12.92□□□□□ -0.34
Trex1Q91XB0 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Gm12712-201ENSMUST00000120676 801 ntBASIC12.92□□□□□ -0.34
Trex1Q91XB0 Gm15196-201ENSMUST00000121406 482 ntBASIC12.92□□□□□ -0.34
Trex1Q91XB0 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Gm9372-201ENSMUST00000168454 430 ntBASIC12.92□□□□□ -0.34
Trex1Q91XB0 Gm24328-201ENSMUST00000175104 67 ntBASIC12.92□□□□□ -0.34
Trex1Q91XB0 Gm9162-201ENSMUST00000182081 991 ntBASIC12.92□□□□□ -0.34
Trex1Q91XB0 Gm19927-201ENSMUST00000185792 781 ntBASIC12.92□□□□□ -0.34
Trex1Q91XB0 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trex1Q91XB0 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12.92□□□□□ -0.34
Trex1Q91XB0 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Gm5178-201ENSMUST00000219380 898 ntBASIC12.92□□□□□ -0.34
Trex1Q91XB0 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trex1Q91XB0 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trex1Q91XB0 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trex1Q91XB0 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.92□□□□□ -0.34
Trex1Q91XB0 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trex1Q91XB0 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trex1Q91XB0 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trex1Q91XB0 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trex1Q91XB0 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trex1Q91XB0 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trex1Q91XB0 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trex1Q91XB0 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trex1Q91XB0 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trex1Q91XB0 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trex1Q91XB0 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trex1Q91XB0 Gm42499-201ENSMUST00000196193 1412 ntBASIC12.91□□□□□ -0.34
Trex1Q91XB0 AC155245.1-201ENSMUST00000222266 1804 ntBASIC12.91□□□□□ -0.34
Trex1Q91XB0 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trex1Q91XB0 Gm23612-201ENSMUST00000103823 110 ntBASIC12.91□□□□□ -0.34
Trex1Q91XB0 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC12.91□□□□□ -0.34
Trex1Q91XB0 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC12.91□□□□□ -0.34
Trex1Q91XB0 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trex1Q91XB0 Gm13019-201ENSMUST00000120000 276 ntBASIC12.91□□□□□ -0.34
Trex1Q91XB0 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trex1Q91XB0 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trex1Q91XB0 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trex1Q91XB0 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.91□□□□□ -0.34
Trex1Q91XB0 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trex1Q91XB0 Gm23576-201ENSMUST00000179918 110 ntBASIC12.91□□□□□ -0.34
Trex1Q91XB0 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC12.91□□□□□ -0.34
Trex1Q91XB0 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms