Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 AC167022.1-201ENSMUST00000218647 1458 ntBASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 Gm20414-201ENSMUST00000172918 646 ntBASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 Snord55-201ENSMUST00000174939 79 ntBASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 Gm19640-201ENSMUST00000214849 464 ntBASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 BC106175-202ENSMUST00000219344 1213 ntBASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 AC153962.2-201ENSMUST00000219417 550 ntBASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chmp7Q8R1T1 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chmp7Q8R1T1 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chmp7Q8R1T1 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC14.46□□□□□ -0.1
Chmp7Q8R1T1 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Chmp7Q8R1T1 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Chmp7Q8R1T1 Gm43075-201ENSMUST00000198613 3905 ntBASIC14.46□□□□□ -0.1
Chmp7Q8R1T1 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Gm37651-201ENSMUST00000194679 1494 ntBASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Gm7541-201ENSMUST00000118361 535 ntBASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Gm12948-201ENSMUST00000119406 682 ntBASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Gm16165-201ENSMUST00000160140 795 ntBASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Gm25677-201ENSMUST00000174983 72 ntBASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Gm9507-202ENSMUST00000180157 654 ntBASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Gm9162-201ENSMUST00000182081 991 ntBASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Mrip-ps-201ENSMUST00000184613 940 ntBASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Gm9916-201ENSMUST00000192943 1228 ntBASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Gm42499-201ENSMUST00000196193 1412 ntBASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Gm43002-201ENSMUST00000200310 155 ntBASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Gm5178-201ENSMUST00000219380 898 ntBASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Gm43172-201ENSMUST00000202139 2137 ntBASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Chmp7Q8R1T1 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm6157-201ENSMUST00000199935 1897 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm13019-201ENSMUST00000120000 276 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm23400-201ENSMUST00000174994 102 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm26463-201ENSMUST00000175065 101 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm24332-201ENSMUST00000175102 102 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm25959-201ENSMUST00000175112 102 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm22475-201ENSMUST00000175169 102 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm22903-201ENSMUST00000175193 102 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm25070-201ENSMUST00000175237 102 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms