Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Clrn1Q8K445 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.66□□□□□ -0.7
Clrn1Q8K445 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Gm8111-201ENSMUST00000117659 987 ntBASIC10.66□□□□□ -0.7
Clrn1Q8K445 Gm15617-201ENSMUST00000118973 771 ntBASIC10.66□□□□□ -0.7
Clrn1Q8K445 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.66□□□□□ -0.7
Clrn1Q8K445 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.66□□□□□ -0.7
Clrn1Q8K445 Gm26461-201ENSMUST00000175064 290 ntBASIC10.66□□□□□ -0.7
Clrn1Q8K445 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Gm43186-201ENSMUST00000198130 824 ntBASIC10.66□□□□□ -0.7
Clrn1Q8K445 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.66□□□□□ -0.7
Clrn1Q8K445 AC154276.3-201ENSMUST00000227643 998 ntBASIC10.66□□□□□ -0.7
Clrn1Q8K445 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Clrn1Q8K445 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.65□□□□□ -0.7
Clrn1Q8K445 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Gm23045-201ENSMUST00000175041 96 ntBASIC10.65□□□□□ -0.7
Clrn1Q8K445 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.65□□□□□ -0.7
Clrn1Q8K445 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Gm17831-201ENSMUST00000205579 900 ntBASIC10.65□□□□□ -0.7
Clrn1Q8K445 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Gm9826-201ENSMUST00000029124 1299 ntBASIC10.65□□□□□ -0.7
Clrn1Q8K445 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms