Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Gm14314-201ENSMUST00000118225 1015 ntBASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Gm11956-201ENSMUST00000119525 512 ntBASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Gm23045-201ENSMUST00000175041 96 ntBASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Gm18367-201ENSMUST00000176139 600 ntBASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Gm9211-201ENSMUST00000182882 975 ntBASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Mir6546-201ENSMUST00000184460 62 ntBASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Gm43966-201ENSMUST00000203301 612 ntBASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Gm12247-201ENSMUST00000117585 670 ntBASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Gm11836-201ENSMUST00000121022 441 ntBASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Gm4726-201ENSMUST00000135604 736 ntBASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Gm6019-201ENSMUST00000148369 736 ntBASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Gm3329-201ENSMUST00000159873 556 ntBASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Gm8342-201ENSMUST00000209839 757 ntBASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Olfr584-201ENSMUST00000098210 964 ntBASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rfwd3Q8CIK8 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms