Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Gm10051-201ENSMUST00000145209 414 ntBASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Mir8115-201ENSMUST00000184992 119 ntBASIC11.65□□□□□ -0.54
Trub1Q8C0D0 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Gm37284-201ENSMUST00000193607 539 ntBASIC11.65□□□□□ -0.54
Trub1Q8C0D0 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.65□□□□□ -0.54
Trub1Q8C0D0 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.65□□□□□ -0.54
Trub1Q8C0D0 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.65□□□□□ -0.54
Trub1Q8C0D0 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.65□□□□□ -0.55
Trub1Q8C0D0 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trub1Q8C0D0 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Trub1Q8C0D0 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trub1Q8C0D0 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trub1Q8C0D0 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trub1Q8C0D0 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trub1Q8C0D0 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Gm16166-201ENSMUST00000118291 787 ntBASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Gm15573-201ENSMUST00000119487 540 ntBASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Gm16219-201ENSMUST00000120096 274 ntBASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Gm12566-201ENSMUST00000121479 359 ntBASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.64□□□□□ -0.55
Trub1Q8C0D0 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Gm23045-201ENSMUST00000175041 96 ntBASIC11.64□□□□□ -0.55
Trub1Q8C0D0 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.64□□□□□ -0.55
Trub1Q8C0D0 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Gm5451-201ENSMUST00000080545 579 ntBASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Gm23105-201ENSMUST00000083719 134 ntBASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trub1Q8C0D0 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms