Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp54Q8BL06 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp54Q8BL06 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp54Q8BL06 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp54Q8BL06 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp54Q8BL06 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp54Q8BL06 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp54Q8BL06 Gm6560-201ENSMUST00000198588 1591 ntBASIC15.81■□□□□ 0.12
Usp54Q8BL06 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp54Q8BL06 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp54Q8BL06 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp54Q8BL06 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Usp54Q8BL06 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp54Q8BL06 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Usp54Q8BL06 Gm12009-201ENSMUST00000121361 1100 ntBASIC15.81■□□□□ 0.12
Usp54Q8BL06 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC15.81■□□□□ 0.12
Usp54Q8BL06 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC15.81■□□□□ 0.12
Usp54Q8BL06 Gm15258-201ENSMUST00000153801 741 ntBASIC15.81■□□□□ 0.12
Usp54Q8BL06 Gm27833-201ENSMUST00000184285 124 ntBASIC15.81■□□□□ 0.12
Usp54Q8BL06 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp54Q8BL06 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp54Q8BL06 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp54Q8BL06 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Usp54Q8BL06 AC137950.2-202ENSMUST00000227150 1635 ntBASIC15.81■□□□□ 0.12
Usp54Q8BL06 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp54Q8BL06 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC15.81■□□□□ 0.12
Usp54Q8BL06 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp54Q8BL06 AC167565.1-201ENSMUST00000226980 1833 ntBASIC15.81■□□□□ 0.12
Usp54Q8BL06 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp54Q8BL06 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp54Q8BL06 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp54Q8BL06 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp54Q8BL06 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp54Q8BL06 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC15.8■□□□□ 0.12
Usp54Q8BL06 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp54Q8BL06 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Usp54Q8BL06 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Usp54Q8BL06 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC15.8■□□□□ 0.12
Usp54Q8BL06 Gm11473-201ENSMUST00000118980 359 ntBASIC15.8■□□□□ 0.12
Usp54Q8BL06 Gm15746-201ENSMUST00000120684 1027 ntBASIC15.8■□□□□ 0.12
Usp54Q8BL06 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp54Q8BL06 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC15.8■□□□□ 0.12
Usp54Q8BL06 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC15.8■□□□□ 0.12
Usp54Q8BL06 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC15.8■□□□□ 0.12
Usp54Q8BL06 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp54Q8BL06 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Usp54Q8BL06 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Usp54Q8BL06 Gm8226-201ENSMUST00000190511 798 ntBASIC15.8■□□□□ 0.12
Usp54Q8BL06 AC129217.1-201ENSMUST00000225181 642 ntBASIC15.8■□□□□ 0.12
Usp54Q8BL06 AC154477.1-201ENSMUST00000226515 773 ntBASIC15.8■□□□□ 0.12
Usp54Q8BL06 AC137842.2-201ENSMUST00000227734 797 ntBASIC15.8■□□□□ 0.12
Usp54Q8BL06 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Usp54Q8BL06 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp54Q8BL06 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp54Q8BL06 Gm42833-201ENSMUST00000196019 2124 ntBASIC15.8■□□□□ 0.12
Usp54Q8BL06 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Usp54Q8BL06 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp54Q8BL06 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Usp54Q8BL06 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp54Q8BL06 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp54Q8BL06 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp54Q8BL06 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp54Q8BL06 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp54Q8BL06 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Usp54Q8BL06 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Usp54Q8BL06 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp54Q8BL06 Gm38312-201ENSMUST00000195426 1746 ntBASIC15.8■□□□□ 0.12
Usp54Q8BL06 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Usp54Q8BL06 Gm43727-201ENSMUST00000198021 2647 ntBASIC15.79■□□□□ 0.12
Usp54Q8BL06 Gm14176-201ENSMUST00000121302 477 ntBASIC15.79■□□□□ 0.12
Usp54Q8BL06 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC15.79■□□□□ 0.12
Usp54Q8BL06 Gm6216-201ENSMUST00000182390 687 ntBASIC15.79■□□□□ 0.12
Usp54Q8BL06 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC15.79■□□□□ 0.12
Usp54Q8BL06 Gm29304-201ENSMUST00000186555 695 ntBASIC15.79■□□□□ 0.12
Usp54Q8BL06 Gm29223-201ENSMUST00000188867 695 ntBASIC15.79■□□□□ 0.12
Usp54Q8BL06 Gm38233-201ENSMUST00000194259 807 ntBASIC15.79■□□□□ 0.12
Usp54Q8BL06 Gm37921-201ENSMUST00000194333 695 ntBASIC15.79■□□□□ 0.12
Usp54Q8BL06 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
Usp54Q8BL06 Gm8557-201ENSMUST00000220777 475 ntBASIC15.79■□□□□ 0.12
Usp54Q8BL06 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Usp54Q8BL06 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC15.79■□□□□ 0.12
Usp54Q8BL06 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Usp54Q8BL06 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp54Q8BL06 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Usp54Q8BL06 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp54Q8BL06 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp54Q8BL06 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp54Q8BL06 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp54Q8BL06 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC15.79■□□□□ 0.12
Usp54Q8BL06 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Usp54Q8BL06 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Usp54Q8BL06 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp54Q8BL06 Gm38111-201ENSMUST00000194817 2741 ntBASIC15.79■□□□□ 0.12
Usp54Q8BL06 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC15.79■□□□□ 0.12
Usp54Q8BL06 Gm14006-201ENSMUST00000122132 981 ntBASIC15.79■□□□□ 0.12
Usp54Q8BL06 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC15.79■□□□□ 0.12
Usp54Q8BL06 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Usp54Q8BL06 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Usp54Q8BL06 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC15.79■□□□□ 0.12
Usp54Q8BL06 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms