Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.21□□□□□ -0.45
Nop53Q8BK35 Gm7003-201ENSMUST00000195089 312 ntBASIC12.21□□□□□ -0.45
Nop53Q8BK35 Gm43138-201ENSMUST00000199123 708 ntBASIC12.21□□□□□ -0.45
Nop53Q8BK35 AY036118-201ENSMUST00000200021 923 ntBASIC12.21□□□□□ -0.45
Nop53Q8BK35 Gm7940-201ENSMUST00000218195 769 ntBASIC12.21□□□□□ -0.45
Nop53Q8BK35 Nsd1-205ENSMUST00000224693 852 ntBASIC12.21□□□□□ -0.45
Nop53Q8BK35 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nop53Q8BK35 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nop53Q8BK35 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Nop53Q8BK35 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nop53Q8BK35 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nop53Q8BK35 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Nop53Q8BK35 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nop53Q8BK35 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nop53Q8BK35 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.21□□□□□ -0.46
Nop53Q8BK35 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nop53Q8BK35 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nop53Q8BK35 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nop53Q8BK35 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nop53Q8BK35 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Nop53Q8BK35 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.21□□□□□ -0.46
Nop53Q8BK35 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nop53Q8BK35 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.21□□□□□ -0.46
Nop53Q8BK35 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nop53Q8BK35 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nop53Q8BK35 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.21□□□□□ -0.46
Nop53Q8BK35 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.2□□□□□ -0.46
Nop53Q8BK35 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nop53Q8BK35 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Gm14579-201ENSMUST00000117068 283 ntBASIC12.2□□□□□ -0.46
Nop53Q8BK35 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.2□□□□□ -0.46
Nop53Q8BK35 Gm15207-201ENSMUST00000119259 442 ntBASIC12.2□□□□□ -0.46
Nop53Q8BK35 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.2□□□□□ -0.46
Nop53Q8BK35 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Gm3329-201ENSMUST00000159873 556 ntBASIC12.2□□□□□ -0.46
Nop53Q8BK35 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Gm5616-201ENSMUST00000165252 384 ntBASIC12.2□□□□□ -0.46
Nop53Q8BK35 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Gm8741-201ENSMUST00000174736 384 ntBASIC12.2□□□□□ -0.46
Nop53Q8BK35 Gm43222-201ENSMUST00000199013 603 ntBASIC12.2□□□□□ -0.46
Nop53Q8BK35 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Gm8679-201ENSMUST00000210651 1036 ntBASIC12.2□□□□□ -0.46
Nop53Q8BK35 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.2□□□□□ -0.46
Nop53Q8BK35 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.2□□□□□ -0.46
Nop53Q8BK35 AC132446.1-201ENSMUST00000222655 226 ntBASIC12.2□□□□□ -0.46
Nop53Q8BK35 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.2□□□□□ -0.46
Nop53Q8BK35 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nop53Q8BK35 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nop53Q8BK35 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.19□□□□□ -0.46
Nop53Q8BK35 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.19□□□□□ -0.46
Nop53Q8BK35 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nop53Q8BK35 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nop53Q8BK35 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nop53Q8BK35 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nop53Q8BK35 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC12.19□□□□□ -0.46
Nop53Q8BK35 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nop53Q8BK35 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms