Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Gm13981-201ENSMUST00000122360 447 ntBASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Gm4982-201ENSMUST00000160440 1098 ntBASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Gm7719-201ENSMUST00000182374 975 ntBASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Gm42660-201ENSMUST00000197733 947 ntBASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 AC122024.3-201ENSMUST00000217719 294 ntBASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Gm23612-201ENSMUST00000103823 110 ntBASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Gm9133-201ENSMUST00000118289 540 ntBASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Gm11578-201ENSMUST00000118530 459 ntBASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Gm14497-201ENSMUST00000119537 580 ntBASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Gm9372-201ENSMUST00000168454 430 ntBASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Gm23576-201ENSMUST00000179918 110 ntBASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Gm26976-201ENSMUST00000182929 908 ntBASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Gm42430-201ENSMUST00000197209 616 ntBASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 AC115304.2-201ENSMUST00000226399 332 ntBASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smarcal1Q8BJL0 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Smarcal1Q8BJL0 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Smarcal1Q8BJL0 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.08□□□□□ -0.47
Smarcal1Q8BJL0 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Smarcal1Q8BJL0 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.08□□□□□ -0.48
Smarcal1Q8BJL0 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcal1Q8BJL0 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.08□□□□□ -0.48
Smarcal1Q8BJL0 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC12.08□□□□□ -0.48
Smarcal1Q8BJL0 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC12.08□□□□□ -0.48
Smarcal1Q8BJL0 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Smarcal1Q8BJL0 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcal1Q8BJL0 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcal1Q8BJL0 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcal1Q8BJL0 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12.08□□□□□ -0.48
Smarcal1Q8BJL0 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcal1Q8BJL0 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcal1Q8BJL0 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcal1Q8BJL0 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcal1Q8BJL0 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Smarcal1Q8BJL0 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Smarcal1Q8BJL0 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcal1Q8BJL0 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.08□□□□□ -0.48
Smarcal1Q8BJL0 Gm15617-201ENSMUST00000118973 771 ntBASIC12.08□□□□□ -0.48
Smarcal1Q8BJL0 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smarcal1Q8BJL0 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.08□□□□□ -0.48
Smarcal1Q8BJL0 Gm5529-201ENSMUST00000165691 891 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms