Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp2bQ8BJF9 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Gm22323-201ENSMUST00000103832 109 ntBASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Gm13996-201ENSMUST00000118456 430 ntBASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Gm7150-201ENSMUST00000122032 981 ntBASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Gm26047-201ENSMUST00000157308 113 ntBASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Gm17376-201ENSMUST00000166016 84 ntBASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Gm26047-202ENSMUST00000198840 115 ntBASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Gm3961-201ENSMUST00000204425 994 ntBASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Gm270-201ENSMUST00000223010 976 ntBASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chmp2bQ8BJF9 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.55
Chmp2bQ8BJF9 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Gm12857-201ENSMUST00000117678 592 ntBASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Gm12380-201ENSMUST00000119012 544 ntBASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Gm24749-201ENSMUST00000157838 343 ntBASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Gm25890-201ENSMUST00000177643 165 ntBASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Gm22614-201ENSMUST00000178300 165 ntBASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Gm3332-201ENSMUST00000189337 928 ntBASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Gm28071-201ENSMUST00000190355 478 ntBASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Gm38151-201ENSMUST00000195085 289 ntBASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Gm18038-201ENSMUST00000197900 485 ntBASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Gm45433-201ENSMUST00000209386 247 ntBASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Gm4978-201ENSMUST00000071565 801 ntBASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Gm22042-201ENSMUST00000082989 165 ntBASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Gm26110-201ENSMUST00000083971 165 ntBASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Chmp2bQ8BJF9 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms