Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Gm5733-201ENSMUST00000190232 939 ntBASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Gm4857-201ENSMUST00000192718 785 ntBASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Ntng1-201ENSMUST00000051253 327 ntBASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nucks1Q80XU3 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.06□□□□□ -0.48
Nucks1Q80XU3 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.06□□□□□ -0.48
Nucks1Q80XU3 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Gm14058-201ENSMUST00000116082 735 ntBASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Uba52-ps-201ENSMUST00000183770 379 ntBASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Gm9540-201ENSMUST00000188230 478 ntBASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Gm7504-201ENSMUST00000201449 424 ntBASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Gm42867-201ENSMUST00000202995 469 ntBASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 AC122273.1-201ENSMUST00000213634 2327 ntBASIC12.06□□□□□ -0.48
Nucks1Q80XU3 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Nucks1Q80XU3 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Nucks1Q80XU3 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Nucks1Q80XU3 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nucks1Q80XU3 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Nucks1Q80XU3 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nucks1Q80XU3 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms