Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Gm24891-201ENSMUST00000104391 136 ntBASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Gm22711-201ENSMUST00000116890 133 ntBASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Gm7857-201ENSMUST00000117957 358 ntBASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Gm12997-201ENSMUST00000120207 640 ntBASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Gm15566-201ENSMUST00000121130 590 ntBASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Gm18367-201ENSMUST00000176139 600 ntBASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Gm12407-201ENSMUST00000180219 324 ntBASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Gm42660-201ENSMUST00000197733 947 ntBASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Gm44044-201ENSMUST00000205178 1089 ntBASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Gm12247-201ENSMUST00000117585 670 ntBASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Gm11893-201ENSMUST00000117829 491 ntBASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Gm13809-201ENSMUST00000117921 597 ntBASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Gm15617-201ENSMUST00000118973 771 ntBASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Gm15329-201ENSMUST00000121408 155 ntBASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Gm15549-201ENSMUST00000121595 622 ntBASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Gm16107-201ENSMUST00000162523 862 ntBASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Olfml3-204ENSMUST00000169286 874 ntBASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Gm25732-201ENSMUST00000175168 60 ntBASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Gm37246-201ENSMUST00000192665 835 ntBASIC11.12□□□□□ -0.63
Ccdc116Q80X53 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.12□□□□□ -0.63
Ccdc116Q80X53 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.12□□□□□ -0.63
Ccdc116Q80X53 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.12□□□□□ -0.63
Ccdc116Q80X53 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc116Q80X53 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccdc116Q80X53 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc116Q80X53 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc116Q80X53 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc116Q80X53 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc116Q80X53 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc116Q80X53 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms