Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trim62Q80V85 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
Trim62Q80V85 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trim62Q80V85 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim62Q80V85 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim62Q80V85 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim62Q80V85 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim62Q80V85 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trim62Q80V85 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.72□□□□□ -0.53
Trim62Q80V85 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.72□□□□□ -0.53
Trim62Q80V85 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim62Q80V85 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim62Q80V85 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trim62Q80V85 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim62Q80V85 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Trim62Q80V85 Gm43520-201ENSMUST00000197996 164 ntBASIC11.72□□□□□ -0.53
Trim62Q80V85 Gm3786-201ENSMUST00000202659 378 ntBASIC11.72□□□□□ -0.53
Trim62Q80V85 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Trim62Q80V85 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.72□□□□□ -0.53
Trim62Q80V85 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim62Q80V85 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim62Q80V85 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim62Q80V85 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim62Q80V85 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim62Q80V85 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim62Q80V85 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim62Q80V85 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim62Q80V85 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim62Q80V85 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trim62Q80V85 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim62Q80V85 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.71□□□□□ -0.53
Trim62Q80V85 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim62Q80V85 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim62Q80V85 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim62Q80V85 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim62Q80V85 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim62Q80V85 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.71□□□□□ -0.53
Trim62Q80V85 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim62Q80V85 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.71□□□□□ -0.53
Trim62Q80V85 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim62Q80V85 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trim62Q80V85 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim62Q80V85 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim62Q80V85 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Trim62Q80V85 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim62Q80V85 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trim62Q80V85 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trim62Q80V85 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Trim62Q80V85 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trim62Q80V85 Gm13888-201ENSMUST00000119148 422 ntBASIC11.71□□□□□ -0.53
Trim62Q80V85 Gm1848-201ENSMUST00000120711 789 ntBASIC11.71□□□□□ -0.53
Trim62Q80V85 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim62Q80V85 Gm4917-201ENSMUST00000121452 650 ntBASIC11.71□□□□□ -0.53
Trim62Q80V85 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.71□□□□□ -0.53
Trim62Q80V85 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim62Q80V85 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim62Q80V85 Gm10731-201ENSMUST00000181171 448 ntBASIC11.71□□□□□ -0.53
Trim62Q80V85 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.71□□□□□ -0.53
Trim62Q80V85 Gm5051-201ENSMUST00000204085 485 ntBASIC11.71□□□□□ -0.53
Trim62Q80V85 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim62Q80V85 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trim62Q80V85 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim62Q80V85 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim62Q80V85 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trim62Q80V85 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trim62Q80V85 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim62Q80V85 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.71□□□□□ -0.53
Trim62Q80V85 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim62Q80V85 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim62Q80V85 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim62Q80V85 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim62Q80V85 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim62Q80V85 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trim62Q80V85 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim62Q80V85 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trim62Q80V85 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim62Q80V85 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trim62Q80V85 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim62Q80V85 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim62Q80V85 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim62Q80V85 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim62Q80V85 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim62Q80V85 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.54
Trim62Q80V85 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trim62Q80V85 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim62Q80V85 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim62Q80V85 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim62Q80V85 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.7□□□□□ -0.54
Trim62Q80V85 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim62Q80V85 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim62Q80V85 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim62Q80V85 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim62Q80V85 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.7□□□□□ -0.54
Trim62Q80V85 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim62Q80V85 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trim62Q80V85 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim62Q80V85 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim62Q80V85 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim62Q80V85 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim62Q80V85 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms