Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Gm37905-201ENSMUST00000195310 341 ntBASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Gm5302-201ENSMUST00000202130 796 ntBASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.31□□□□□ -0.6
Rpp38Q80UU2 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpp38Q80UU2 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Gm13422-201ENSMUST00000118834 504 ntBASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.3□□□□□ -0.6
Rpp38Q80UU2 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Gm37826-201ENSMUST00000195329 322 ntBASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Gm30946-201ENSMUST00000198288 724 ntBASIC11.3□□□□□ -0.6
Rpp38Q80UU2 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.3□□□□□ -0.6
Rpp38Q80UU2 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Rpp38Q80UU2 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpp38Q80UU2 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.29□□□□□ -0.6
Rpp38Q80UU2 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpp38Q80UU2 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpp38Q80UU2 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Rpp38Q80UU2 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rpp38Q80UU2 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpp38Q80UU2 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.29□□□□□ -0.6
Rpp38Q80UU2 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpp38Q80UU2 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpp38Q80UU2 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpp38Q80UU2 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Rpp38Q80UU2 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.29□□□□□ -0.6
Rpp38Q80UU2 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.29□□□□□ -0.6
Rpp38Q80UU2 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.29□□□□□ -0.6
Rpp38Q80UU2 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.29□□□□□ -0.6
Rpp38Q80UU2 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.29□□□□□ -0.6
Rpp38Q80UU2 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.29□□□□□ -0.6
Rpp38Q80UU2 Gm43138-201ENSMUST00000199123 708 ntBASIC11.29□□□□□ -0.6
Rpp38Q80UU2 Saa-ps-201ENSMUST00000211148 320 ntBASIC11.29□□□□□ -0.6
Rpp38Q80UU2 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Rpp38Q80UU2 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpp38Q80UU2 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Rpp38Q80UU2 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rpp38Q80UU2 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms