Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Rad54bQ6PFE3 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rad54bQ6PFE3 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rad54bQ6PFE3 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Snord17-201ENSMUST00000104526 238 ntBASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Gm15198-201ENSMUST00000117283 177 ntBASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Gm8199-201ENSMUST00000121323 823 ntBASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Mir1896-201ENSMUST00000122641 81 ntBASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Gm8342-201ENSMUST00000209839 757 ntBASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rad54bQ6PFE3 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Rad54bQ6PFE3 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rad54bQ6PFE3 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
Rad54bQ6PFE3 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rad54bQ6PFE3 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Rad54bQ6PFE3 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Rad54bQ6PFE3 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Gm9540-201ENSMUST00000188230 478 ntBASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Gm29499-201ENSMUST00000189151 486 ntBASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Gm28329-201ENSMUST00000191208 689 ntBASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Gm29171-201ENSMUST00000191397 486 ntBASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Gm43179-201ENSMUST00000198797 275 ntBASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Gm4482-201ENSMUST00000200876 742 ntBASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Gm6082-201ENSMUST00000215204 454 ntBASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rad54bQ6PFE3 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms