Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 AC164099.1-201ENSMUST00000227780 333 ntBASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Gm43773-201ENSMUST00000198548 2162 ntBASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Gm1826-201ENSMUST00000118646 1162 ntBASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Gng5-ps-201ENSMUST00000120931 205 ntBASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Mir6953-201ENSMUST00000184745 68 ntBASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Gm20781-201ENSMUST00000193154 693 ntBASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Gm21736-201ENSMUST00000195399 693 ntBASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 AC122891.1-201ENSMUST00000218671 268 ntBASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Gm5513-201ENSMUST00000072982 1218 ntBASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Snrnp40Q6PE01 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Snrnp40Q6PE01 Gm44740-201ENSMUST00000205603 1614 ntBASIC9.96□□□□□ -0.81
Snrnp40Q6PE01 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms