Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Gm8566-201ENSMUST00000120174 465 ntBASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Gm24990-201ENSMUST00000157406 323 ntBASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Gm8815-201ENSMUST00000173809 620 ntBASIC12.5□□□□□ -0.41
Krt39Q6IFX4 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.5□□□□□ -0.41
Krt39Q6IFX4 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 AC207128.2-201ENSMUST00000223708 1924 ntBASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Krt39Q6IFX4 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 Gm8752-201ENSMUST00000173427 1694 ntBASIC12.48□□□□□ -0.41
Krt39Q6IFX4 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms