Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Scube3Q66PY1 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.17□□□□□ -0.46
Scube3Q66PY1 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Mir669l-201ENSMUST00000103771 98 ntBASIC12.17□□□□□ -0.46
Scube3Q66PY1 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.17□□□□□ -0.46
Scube3Q66PY1 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Gm11836-201ENSMUST00000121022 441 ntBASIC12.17□□□□□ -0.46
Scube3Q66PY1 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.17□□□□□ -0.46
Scube3Q66PY1 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC12.17□□□□□ -0.46
Scube3Q66PY1 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.17□□□□□ -0.46
Scube3Q66PY1 Mterf1a-201ENSMUST00000044746 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scube3Q66PY1 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.16□□□□□ -0.46
Scube3Q66PY1 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scube3Q66PY1 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Gm13499-201ENSMUST00000142804 603 ntTSL 3 BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Gm8185-201ENSMUST00000160999 669 ntBASIC12.16□□□□□ -0.46
Scube3Q66PY1 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
Scube3Q66PY1 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scube3Q66PY1 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC12.16□□□□□ -0.46
Scube3Q66PY1 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.16□□□□□ -0.46
Scube3Q66PY1 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.16□□□□□ -0.46
Scube3Q66PY1 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.16□□□□□ -0.46
Scube3Q66PY1 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scube3Q66PY1 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Scube3Q66PY1 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms