Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NfkbibQ60778 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
NfkbibQ60778 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NfkbibQ60778 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC13.56□□□□□ -0.24
NfkbibQ60778 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NfkbibQ60778 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NfkbibQ60778 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NfkbibQ60778 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NfkbibQ60778 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.56□□□□□ -0.24
NfkbibQ60778 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NfkbibQ60778 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
NfkbibQ60778 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC13.56□□□□□ -0.24
NfkbibQ60778 Snord23-201ENSMUST00000116828 109 ntBASIC13.56□□□□□ -0.24
NfkbibQ60778 Gm12986-201ENSMUST00000119037 967 ntBASIC13.56□□□□□ -0.24
NfkbibQ60778 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC13.56□□□□□ -0.24
NfkbibQ60778 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NfkbibQ60778 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NfkbibQ60778 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC13.56□□□□□ -0.24
NfkbibQ60778 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NfkbibQ60778 Gm3793-201ENSMUST00000204973 672 ntBASIC13.56□□□□□ -0.24
NfkbibQ60778 Gm9102-201ENSMUST00000219250 465 ntBASIC13.56□□□□□ -0.24
NfkbibQ60778 Gm7525-201ENSMUST00000219425 454 ntBASIC13.56□□□□□ -0.24
NfkbibQ60778 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NfkbibQ60778 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NfkbibQ60778 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
NfkbibQ60778 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
NfkbibQ60778 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NfkbibQ60778 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NfkbibQ60778 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NfkbibQ60778 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NfkbibQ60778 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NfkbibQ60778 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
NfkbibQ60778 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
NfkbibQ60778 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.56□□□□□ -0.24
NfkbibQ60778 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC13.56□□□□□ -0.24
NfkbibQ60778 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NfkbibQ60778 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC13.55□□□□□ -0.24
NfkbibQ60778 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
NfkbibQ60778 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NfkbibQ60778 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NfkbibQ60778 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NfkbibQ60778 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NfkbibQ60778 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
NfkbibQ60778 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
NfkbibQ60778 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
NfkbibQ60778 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
NfkbibQ60778 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC13.55□□□□□ -0.24
NfkbibQ60778 Gm14807-201ENSMUST00000116640 983 ntBASIC13.55□□□□□ -0.24
NfkbibQ60778 Gm6322-201ENSMUST00000118789 1004 ntBASIC13.55□□□□□ -0.24
NfkbibQ60778 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NfkbibQ60778 Gm22379-201ENSMUST00000157480 131 ntBASIC13.55□□□□□ -0.24
NfkbibQ60778 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC13.55□□□□□ -0.24
NfkbibQ60778 Gm9081-201ENSMUST00000182346 991 ntBASIC13.55□□□□□ -0.24
NfkbibQ60778 Gm19013-201ENSMUST00000183895 1222 ntBASIC13.55□□□□□ -0.24
NfkbibQ60778 Gm19014-201ENSMUST00000184828 1189 ntBASIC13.55□□□□□ -0.24
NfkbibQ60778 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.55□□□□□ -0.24
NfkbibQ60778 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13.55□□□□□ -0.24
NfkbibQ60778 Gm7183-201ENSMUST00000213870 1005 ntBASIC13.55□□□□□ -0.24
NfkbibQ60778 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.55□□□□□ -0.24
NfkbibQ60778 AC129975.1-201ENSMUST00000224816 592 ntBASIC13.55□□□□□ -0.24
NfkbibQ60778 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NfkbibQ60778 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NfkbibQ60778 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
NfkbibQ60778 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NfkbibQ60778 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NfkbibQ60778 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NfkbibQ60778 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NfkbibQ60778 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
NfkbibQ60778 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NfkbibQ60778 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NfkbibQ60778 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NfkbibQ60778 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
NfkbibQ60778 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NfkbibQ60778 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NfkbibQ60778 Gm6560-201ENSMUST00000198588 1591 ntBASIC13.54□□□□□ -0.24
NfkbibQ60778 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NfkbibQ60778 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NfkbibQ60778 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NfkbibQ60778 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NfkbibQ60778 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NfkbibQ60778 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NfkbibQ60778 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NfkbibQ60778 Mir453-201ENSMUST00000104732 82 ntBASIC13.54□□□□□ -0.24
NfkbibQ60778 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC13.54□□□□□ -0.24
NfkbibQ60778 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NfkbibQ60778 Gm16030-201ENSMUST00000159098 603 ntBASIC13.54□□□□□ -0.24
NfkbibQ60778 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC13.54□□□□□ -0.24
NfkbibQ60778 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NfkbibQ60778 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NfkbibQ60778 Gm42655-201ENSMUST00000202782 1134 ntBASIC13.54□□□□□ -0.24
NfkbibQ60778 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
NfkbibQ60778 Gm7082-201ENSMUST00000209880 969 ntBASIC13.54□□□□□ -0.24
NfkbibQ60778 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.54□□□□□ -0.24
NfkbibQ60778 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
NfkbibQ60778 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NfkbibQ60778 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NfkbibQ60778 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NfkbibQ60778 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NfkbibQ60778 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NfkbibQ60778 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms