Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Foxd4Q60688 Gm44213-201ENSMUST00000204977 703 ntBASIC12.22□□□□□ -0.45
Foxd4Q60688 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC12.22□□□□□ -0.45
Foxd4Q60688 Gm6082-201ENSMUST00000215204 454 ntBASIC12.22□□□□□ -0.45
Foxd4Q60688 Gm7046-201ENSMUST00000221351 977 ntBASIC12.22□□□□□ -0.45
Foxd4Q60688 Gm3333-202ENSMUST00000221763 1044 ntBASIC12.22□□□□□ -0.45
Foxd4Q60688 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Foxd4Q60688 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Foxd4Q60688 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.22□□□□□ -0.45
Foxd4Q60688 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.22□□□□□ -0.45
Foxd4Q60688 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxd4Q60688 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Foxd4Q60688 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxd4Q60688 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxd4Q60688 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxd4Q60688 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxd4Q60688 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Foxd4Q60688 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Foxd4Q60688 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxd4Q60688 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxd4Q60688 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.22□□□□□ -0.45
Foxd4Q60688 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Foxd4Q60688 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxd4Q60688 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Foxd4Q60688 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Foxd4Q60688 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.21□□□□□ -0.45
Foxd4Q60688 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Foxd4Q60688 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Foxd4Q60688 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Foxd4Q60688 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Foxd4Q60688 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.21□□□□□ -0.45
Foxd4Q60688 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.21□□□□□ -0.45
Foxd4Q60688 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.21□□□□□ -0.45
Foxd4Q60688 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Foxd4Q60688 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Foxd4Q60688 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Foxd4Q60688 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Foxd4Q60688 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Foxd4Q60688 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Foxd4Q60688 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Foxd4Q60688 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC12.21□□□□□ -0.45
Foxd4Q60688 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.21□□□□□ -0.45
Foxd4Q60688 Gm17219-201ENSMUST00000168439 593 ntBASIC12.21□□□□□ -0.45
Foxd4Q60688 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Foxd4Q60688 Gm24809-201ENSMUST00000175318 271 ntBASIC12.21□□□□□ -0.45
Foxd4Q60688 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Foxd4Q60688 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Foxd4Q60688 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Foxd4Q60688 Gm37489-201ENSMUST00000191883 159 ntBASIC12.21□□□□□ -0.45
Foxd4Q60688 Gm21049-201ENSMUST00000197078 987 ntBASIC12.21□□□□□ -0.45
Foxd4Q60688 Gm42723-201ENSMUST00000199966 1044 ntBASIC12.21□□□□□ -0.45
Foxd4Q60688 Gm42733-201ENSMUST00000201272 519 ntBASIC12.21□□□□□ -0.45
Foxd4Q60688 Gm3786-201ENSMUST00000202659 378 ntBASIC12.21□□□□□ -0.45
Foxd4Q60688 Gm44422-201ENSMUST00000204142 1025 ntBASIC12.21□□□□□ -0.45
Foxd4Q60688 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.21□□□□□ -0.45
Foxd4Q60688 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.45
Foxd4Q60688 Gm10688-201ENSMUST00000214985 520 ntBASIC12.21□□□□□ -0.45
Foxd4Q60688 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Foxd4Q60688 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC12.21□□□□□ -0.45
Foxd4Q60688 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Foxd4Q60688 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Foxd4Q60688 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Foxd4Q60688 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Foxd4Q60688 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Foxd4Q60688 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Foxd4Q60688 Mir433-201ENSMUST00000093564 124 ntBASIC12.21□□□□□ -0.45
Foxd4Q60688 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Foxd4Q60688 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Foxd4Q60688 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Foxd4Q60688 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Foxd4Q60688 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Foxd4Q60688 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Foxd4Q60688 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Foxd4Q60688 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Foxd4Q60688 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.46
Foxd4Q60688 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Foxd4Q60688 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC12.21□□□□□ -0.46
Foxd4Q60688 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Foxd4Q60688 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Foxd4Q60688 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Foxd4Q60688 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxd4Q60688 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxd4Q60688 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxd4Q60688 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Foxd4Q60688 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Foxd4Q60688 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Foxd4Q60688 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxd4Q60688 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxd4Q60688 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Foxd4Q60688 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxd4Q60688 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxd4Q60688 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxd4Q60688 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxd4Q60688 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Foxd4Q60688 Gm14381-201ENSMUST00000122105 414 ntBASIC12.2□□□□□ -0.46
Foxd4Q60688 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.2□□□□□ -0.46
Foxd4Q60688 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Foxd4Q60688 Gm27023-201ENSMUST00000182372 285 ntBASIC12.2□□□□□ -0.46
Foxd4Q60688 Gm27861-201ENSMUST00000183920 214 ntBASIC12.2□□□□□ -0.46
Foxd4Q60688 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 126.3 ms