Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Gm8731-201ENSMUST00000118088 412 ntBASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Gm11500-201ENSMUST00000118237 601 ntBASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.03□□□□□ -0.48
Syne3Q4FZC9 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Gm10807-201ENSMUST00000177134 795 ntBASIC12.03□□□□□ -0.48
Syne3Q4FZC9 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC12.03□□□□□ -0.48
Syne3Q4FZC9 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Syne3Q4FZC9 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Syne3Q4FZC9 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Syne3Q4FZC9 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Syne3Q4FZC9 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Syne3Q4FZC9 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Syne3Q4FZC9 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Syne3Q4FZC9 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.02□□□□□ -0.48
Syne3Q4FZC9 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Syne3Q4FZC9 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Syne3Q4FZC9 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.02□□□□□ -0.49
Syne3Q4FZC9 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Gm4978-201ENSMUST00000071565 801 ntBASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Syne3Q4FZC9 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms