Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Gm5867-201ENSMUST00000063197 592 ntBASIC9.25□□□□□ -0.93
Trim63Q38HM4 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Rsf1-201ENSMUST00000107153 11124 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Tbx4-202ENSMUST00000108045 2959 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Abca17-201ENSMUST00000039324 5202 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 L1cam-201ENSMUST00000066576 4116 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Tmem108-201ENSMUST00000049452 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Mid1-202ENSMUST00000078947 3591 ntTSL 5 BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Nod2-201ENSMUST00000054324 4719 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Sipa1l2-201ENSMUST00000108775 6365 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Entpd5-206ENSMUST00000122194 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Pde2a-212ENSMUST00000211368 3885 ntAPPRIS P3 TSL 5 BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Wnk4-201ENSMUST00000103108 4117 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Pdpr-201ENSMUST00000039333 4938 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 A430046D13Rik-201ENSMUST00000180477 1997 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 AC122382.1-201ENSMUST00000225869 2371 ntBASIC9.24□□□□□ -0.93
Trim63Q38HM4 Adam17-201ENSMUST00000064536 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Adcy3-201ENSMUST00000020984 4348 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Nkiras1-202ENSMUST00000132374 4598 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.24□□□□□ -0.93
Trim63Q38HM4 Gm24830-201ENSMUST00000102024 166 ntBASIC9.24□□□□□ -0.93
Trim63Q38HM4 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Gm8410-201ENSMUST00000117225 605 ntBASIC9.24□□□□□ -0.93
Trim63Q38HM4 Gm15968-201ENSMUST00000119342 1168 ntBASIC9.24□□□□□ -0.93
Trim63Q38HM4 Gm13438-201ENSMUST00000120100 573 ntBASIC9.24□□□□□ -0.93
Trim63Q38HM4 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC9.24□□□□□ -0.93
Trim63Q38HM4 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Gm38314-201ENSMUST00000195709 625 ntBASIC9.24□□□□□ -0.93
Trim63Q38HM4 Gm32111-201ENSMUST00000207689 846 ntBASIC9.24□□□□□ -0.93
Trim63Q38HM4 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Trim63Q38HM4 AC134913.1-201ENSMUST00000224563 504 ntBASIC9.24□□□□□ -0.93
Trim63Q38HM4 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Gm26232-201ENSMUST00000083360 166 ntBASIC9.24□□□□□ -0.93
Trim63Q38HM4 Rnu1b6-201ENSMUST00000083839 166 ntBASIC9.24□□□□□ -0.93
Trim63Q38HM4 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Rdh16f1-201ENSMUST00000128247 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Cyfip2-202ENSMUST00000093166 6298 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Trim63Q38HM4 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Olfr221-204ENSMUST00000216188 2871 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Gm43750-201ENSMUST00000199027 2493 ntBASIC9.24□□□□□ -0.93
Trim63Q38HM4 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Uox-201ENSMUST00000029837 2737 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Taok3-210ENSMUST00000179276 4302 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Gm43823-201ENSMUST00000197391 1808 ntBASIC9.24□□□□□ -0.93
Trim63Q38HM4 AC134898.1-201ENSMUST00000223738 1836 ntBASIC9.24□□□□□ -0.93
Trim63Q38HM4 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Gm45342-201ENSMUST00000210903 1363 ntBASIC9.24□□□□□ -0.93
Trim63Q38HM4 Helz2-202ENSMUST00000108831 10109 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Ankmy1-202ENSMUST00000160548 3246 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Tulp4-209ENSMUST00000149756 8784 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Svs1-201ENSMUST00000037696 2775 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trim63Q38HM4 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.23□□□□□ -0.93
Trim63Q38HM4 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Olfr450-202ENSMUST00000218832 1899 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Pik3c3-202ENSMUST00000115811 3084 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Rims2-205ENSMUST00000227243 4760 ntAPPRIS ALT2 BASIC9.23□□□□□ -0.93
Trim63Q38HM4 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC9.23□□□□□ -0.93
Trim63Q38HM4 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms