Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Gm43362-201ENSMUST00000198192 2470 ntBASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Gm13551-201ENSMUST00000121286 430 ntBASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Gm13861-201ENSMUST00000137136 495 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Atp5h-208ENSMUST00000180072 486 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Gm5652-201ENSMUST00000182336 1008 ntBASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Gm10250-201ENSMUST00000090488 482 ntBASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC5.76□□□□□ -1.49
Ush2AQ2QI47 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Trav15-2-dv6-2-201ENSMUST00000103660 370 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Gm25092-201ENSMUST00000103996 129 ntBASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Gm9855-201ENSMUST00000121229 1194 ntBASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC5.75□□□□□ -1.49
Ush2AQ2QI47 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Gm7251-201ENSMUST00000182661 1009 ntBASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Gm38164-201ENSMUST00000192810 330 ntBASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Gm44451-201ENSMUST00000203767 483 ntBASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Gm6329-201ENSMUST00000209210 936 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Tubb3-202ENSMUST00000212743 776 ntTSL 3 BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Prdx1-204ENSMUST00000135573 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 n-R5s2-201ENSMUST00000101968 119 ntBASIC5.75□□□□□ -1.49
Ush2AQ2QI47 n-R5s194-201ENSMUST00000104719 119 ntBASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Gm8818-201ENSMUST00000110797 1047 ntBASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Gm9075-201ENSMUST00000168738 794 ntBASIC5.75□□□□□ -1.49
Ush2AQ2QI47 n-R5s112-201ENSMUST00000178208 119 ntBASIC5.75□□□□□ -1.49
Ush2AQ2QI47 n-R5s125-201ENSMUST00000179377 119 ntBASIC5.75□□□□□ -1.49
Ush2AQ2QI47 n-R5s120-201ENSMUST00000180000 119 ntBASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Gm5801-201ENSMUST00000182247 780 ntBASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 1810059H22Rik-202ENSMUST00000203662 546 ntTSL 3 BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Gm44709-201ENSMUST00000207649 448 ntTSL 5 BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Gm35177-201ENSMUST00000216525 623 ntTSL 3 BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 AC160112.1-201ENSMUST00000219139 714 ntBASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Gm15283-202ENSMUST00000221427 818 ntTSL 5 BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 BX649293.1-201ENSMUST00000227437 631 ntBASIC5.75□□□□□ -1.49
Ush2AQ2QI47 n-R5s156-201ENSMUST00000083377 105 ntBASIC5.75□□□□□ -1.49
Ush2AQ2QI47 n-R5s33-201ENSMUST00000093713 119 ntBASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Sectm1a-202ENSMUST00000100126 680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Gm3618-201ENSMUST00000112726 384 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Gm13768-201ENSMUST00000116469 929 ntBASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Hnf1aos1-202ENSMUST00000129609 516 ntTSL 2 BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Gm3687-201ENSMUST00000161710 460 ntBASIC5.75□□□□□ -1.49
Ush2AQ2QI47 5730435O14Rik-202ENSMUST00000170047 617 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Gm21965-201ENSMUST00000177770 384 ntBASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Gm11109-201ENSMUST00000180289 384 ntBASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Gm28922-201ENSMUST00000189785 308 ntBASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Pglyrp4-201ENSMUST00000047745 1218 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Ush2AQ2QI47 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms