Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Tff1Q08423 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Tff1Q08423 Gm13347-201ENSMUST00000120298 1353 ntBASIC9.41□□□□□ -0.9
Tff1Q08423 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Tff1Q08423 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Tff1Q08423 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Gm5525-201ENSMUST00000190438 1312 ntBASIC9.41□□□□□ -0.9
Tff1Q08423 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 AC125409.1-201ENSMUST00000223213 3370 ntBASIC9.41□□□□□ -0.9
Tff1Q08423 Gm12380-201ENSMUST00000119012 544 ntBASIC9.41□□□□□ -0.9
Tff1Q08423 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Gm12029-201ENSMUST00000120073 832 ntBASIC9.41□□□□□ -0.9
Tff1Q08423 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Tff1Q08423 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC9.41□□□□□ -0.9
Tff1Q08423 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC9.41□□□□□ -0.9
Tff1Q08423 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC9.41□□□□□ -0.9
Tff1Q08423 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Tff1Q08423 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC9.41□□□□□ -0.9
Tff1Q08423 Gm28686-201ENSMUST00000187404 609 ntBASIC9.41□□□□□ -0.9
Tff1Q08423 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC9.41□□□□□ -0.9
Tff1Q08423 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Gm9797-202ENSMUST00000218003 294 ntBASIC9.41□□□□□ -0.9
Tff1Q08423 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC9.41□□□□□ -0.9
Tff1Q08423 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC9.41□□□□□ -0.9
Tff1Q08423 AC159205.5-202ENSMUST00000224849 386 ntBASIC9.41□□□□□ -0.9
Tff1Q08423 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
Tff1Q08423 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
Tff1Q08423 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC9.41□□□□□ -0.9
Tff1Q08423 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Tff1Q08423 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC9.41□□□□□ -0.9
Tff1Q08423 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC9.41□□□□□ -0.9
Tff1Q08423 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
Tff1Q08423 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.4□□□□□ -0.9
Tff1Q08423 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tff1Q08423 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tff1Q08423 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tff1Q08423 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Tff1Q08423 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.4□□□□□ -0.9
Tff1Q08423 AC091458.1-201ENSMUST00000220902 1361 ntBASIC9.4□□□□□ -0.9
Tff1Q08423 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tff1Q08423 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Tff1Q08423 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tff1Q08423 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tff1Q08423 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Tff1Q08423 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tff1Q08423 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Tff1Q08423 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tff1Q08423 Gm40377-201ENSMUST00000204604 2015 ntBASIC9.4□□□□□ -0.9
Tff1Q08423 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tff1Q08423 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tff1Q08423 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.9
Tff1Q08423 Gm26286-201ENSMUST00000104166 134 ntBASIC9.4□□□□□ -0.9
Tff1Q08423 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC9.4□□□□□ -0.9
Tff1Q08423 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tff1Q08423 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC9.4□□□□□ -0.9
Tff1Q08423 Gm14058-201ENSMUST00000116082 735 ntBASIC9.4□□□□□ -0.9
Tff1Q08423 Gm12165-201ENSMUST00000117047 342 ntBASIC9.4□□□□□ -0.9
Tff1Q08423 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC9.4□□□□□ -0.9
Tff1Q08423 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC9.4□□□□□ -0.9
Tff1Q08423 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Tff1Q08423 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC9.4□□□□□ -0.9
Tff1Q08423 Gm38228-201ENSMUST00000193169 1293 ntBASIC9.4□□□□□ -0.9
Tff1Q08423 AY036118-201ENSMUST00000200021 923 ntBASIC9.4□□□□□ -0.9
Tff1Q08423 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tff1Q08423 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tff1Q08423 Gm5705-201ENSMUST00000066241 711 ntBASIC9.4□□□□□ -0.9
Tff1Q08423 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Tff1Q08423 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Tff1Q08423 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Tff1Q08423 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Tff1Q08423 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tff1Q08423 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Tff1Q08423 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tff1Q08423 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Tff1Q08423 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Tff1Q08423 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms